Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04078 ATGTCATTTGCTGCAAAAACCAAAAGATGGTTAGAGGAACAAGCATTTATTAAAAGTACCATTCTCATTCTTGTCCTTGTTGGTACCTCCATGGTCATTGGAGATGGGATTCTTACCCCAGCTATATCTGTTTTATCTGCTGCTGGCGGTATTACGGTAAATCGCCCAGATGTGGATAACGGAGTAGTTGTGCTGGTTGCTGTTGTAATACTAGTTGGGTTATTCAGCATGCAACATTATGGTACAGATAGAGTTGGTTGGCTCTTTGCTCCAATTGTCCTGCTTTGGCTTCTCCTAATTGGAGGTATAGGTATATTCAACGTCTGGAAATATGGCGCCGGCGTCCTAAGAGCATTTTCACCTGTGTATATATATCGGTATCTAAGAAGAGGAGGTAAAGACAGTTGGACTTCCCTTGGTGGCATCTTGCTTAGCATAACTGGGACAGAGGCTCTTTTTGCTGACCTGGCTCATTTTCCAGTCTCATCTGTACAGATTGCATTTACTCTAGTTGTGTTCCCTTGCCTTCTTTTAGCCTATTCTGGACAGGCTGCTTACCTGACACATAACTTGAATCATTCACAAGATGCTTTTTATCGTTCTATTCCAGACAGAATATACTGGCCAGTATTTGTTGTTGCAACAGCAGCAGCTATAGTTGCGAGCCAAGCCACAATATCCGCAACCTTTTCAATCATTAAGCAAGCCCTTGCTCATGGCTGTTTCCCAAGAGTCAAAGTTGTACATACATCAAAGAAGTTTCTTGGCCAGATATATATTCCAGATATCAATTGGATCCTTATGGTTCTTTGCATTGCTGTTACTGCTGGGTTTAAAAATCAAAGTCAGATTGGAAATGCATATGGTACTTGTGTTGTGCTTGTCATGCTGGTTACAACATTGCTTATGATTTTAATCATGATATTAGTTTGGCGCTGCCATTGGATTCTTGTTGTCCTGTTCACCGGCTTATCATTGATTGTGGAATGCACATACTTCTCTGCTGTACTCTTCAAGGTTGATCAAGGTGGGTGGGCTCCCCTTGCAATTGCTGGAGTATTTCTTATTATTATGTATGTTTGGCATTATGGTACAGTGAAACGCTACGAGTTTGAAATGCATAGCAAGGTCTCAATGGCATGGATTCTTGGGCTTGGTCCAAGTTTAGGACTTGTTCGTGTCCCTGGAATTGGACTAGTTTACACAGAGCTTGCAAGTGGAGTACCCCACATATTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCTGTTGTTGTTTTTGTATGTGTGAAATATCTTCCTGTCTACACAGTCCCAGAAGAAGAGCGGTTCCTTGTCAAGCGGATTGGTCCCAAGAATTTCCACATGTTTCGATGTGTGGCACGATATGGATATAAAGACCTGCATAAGAAAGATGATGATTTTGAGAAGAAGCTCTTTCATAACCTTCTCATGTTTGTTCGGCTTGAGTCTATGATGGAGGGTTGCTCAGATTCAGAAGAATATAGTTTATATGGACAGCAAACTGAACAATCAAGAGATGGCATGTTGAATAACAACAGAAACACAGCTTCAGCGAATGTGGATTTATCAATTTCATCAGTAGATTCAATAGTACCAGCTAGATCTCCAACACATGTGAATTTTACTATTCAATCCTCTGGTCATGGGAGCAGCCAGACTGAGGTTGATGAACTTGAATTTATAAACAACTGTAGGGATGCTGGAGTGGTTCACATACTAGGAAACACAGTTGTGAGGGCCAGGAGGGAGTCAAGATTCTACAAGAAAATAGCTGTTGATTATGTTTATGCATTTCTTAGGAAGATATGCAGGGAAAATAGCGTGATCTTCAATGTTCCACATGAGAGTCTCTTAAATGTTGGTCAGATTTTCTATGTATAG 1908 0.4099 MSFAAKTKRWLEEQAFIKSTILILVLVGTSMVIGDGILTPAISVLSAAGGITVNRPDVDNGVVVLVAVVILVGLFSMQHYGTDRVGWLFAPIVLLWLLLIGGIGIFNVWKYGAGVLRAFSPVYIYRYLRRGGKDSWTSLGGILLSITGTEALFADLAHFPVSSVQIAFTLVVFPCLLLAYSGQAAYLTHNLNHSQDAFYRSIPDRIYWPVFVVATAAAIVASQATISATFSIIKQALAHGCFPRVKVVHTSKKFLGQIYIPDINWILMVLCIAVTAGFKNQSQIGNAYGTCVVLVMLVTTLLMILIMILVWRCHWILVVLFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGVFLIIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDDDFEKKLFHNLLMFVRLESMMEGCSDSEEYSLYGQQTEQSRDGMLNNNRNTASANVDLSISSVDSIVPARSPTHVNFTIQSSGHGSSQTEVDELEFINNCRDAGVVHILGNTVVRARRESRFYKKIAVDYVYAFLRKICRENSVIFNVPHESLLNVGQIFYV. 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04078 635 Pfam K+ potassium transporter 10 468 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g04078 635 NCBIfam potassium uptake protein 5 634 IPR003855 GO:0015079|GO:0016020|GO:0071805
Seca5g04078 635 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 4 633 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04078 Seca-Chr5 98248751 98256393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04078 2 635 Inorganic Solute Cotransporters AT2G35060 77.953 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04078 K03549 - gmx:100794454 1061.21