Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04029 ATGGAAACTCCTAGCTTGGTTGTGGTCTTATCAAACTTGCTGCTTCTCCTAGTTTTGACACAAACAGGCTCAGCTCAACTTACTCGTGGCTACTACAAAAATATATGTCCCAATGTGGAACAGTTAGTGCGCTCTGCTGTGGAGCAGAAGTTCCAACAGACTTTTGTGACTGCTCCTGCCACTCTCAGACTCTTCTTCCATGATTGCTTTGTTCGGGGTTGTGATGCTTCAGTGATACTTGCATCTCCAAATAATCAGGCAGAGAAAGATCATCCTGATGACGTTGGGGGACCATATTATGAGGTTGAATTGGGAAGGCGTGACGGCAGAATATCTACTATTGCAAGTGTTCAACGTCGTCTTCCTCTGCCTGGATTCAATCTAGATCAGCTCAATTCCTTGTTTAGCATCAATGGTCTCTCCCAGACAGATATGATTGCATTATCAGGTGCACATACAATTGGATTCTCTCATTGCAACCGCTTCTCAAAACGAATCTACAACTTCAGCCCCAAAAATAGAATTGACCCAACACTAAATTTACAATATGCCTTGAATCTTAGACAGTCATGCCCTCTGAATGTTGATCCACATGTTGCTATAACAATGGACCCTTTCACACCTCAGCAATTTGACAATCAATACTTCAAGAATTTGCAGCAAGGAATGGGTCTCTTCACTTCTGATCAAGTGCTGTTTACAGATGCAAGGTCAAAGGGCACAGTCAACTTATTTGCATCAAATGAAGCAGCTTTTAGGAATGCGTTTGTTGCTGCTATTACCAAGTTGGGAAGGATAGGTGTTAAAACAGGAAATCAAGGTGAAATAAGGTTTGATTGCACAAGGGTCAACTAG 855 0.4222 METPSLVVVLSNLLLLLVLTQTGSAQLTRGYYKNICPNVEQLVRSAVEQKFQQTFVTAPATLRLFFHDCFVRGCDASVILASPNNQAEKDHPDDVGGPYYEVELGRRDGRISTIASVQRRLPLPGFNLDQLNSLFSINGLSQTDMIALSGAHTIGFSHCNRFSKRIYNFSPKNRIDPTLNLQYALNLRQSCPLNVDPHVAITMDPFTPQQFDNQYFKNLQQGMGLFTSDQVLFTDARSKGTVNLFASNEAAFRNAFVAAITKLGRIGVKTGNQGEIRFDCTRVN. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04029 284 Gene3D Peroxidase, domain 2 122 263 - -
Seca5g04029 284 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Plant peroxidase signature 218 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Plant peroxidase signature 258 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 FunFam Peroxidase 122 263 - -
Seca5g04029 284 Gene3D - 95 284 - -
Seca5g04029 284 PANTHER - 95 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Seca5g04029 284 CDD secretory_peroxidase 26 283 IPR033905 GO:0004601|GO:0042744
Seca5g04029 284 ProSitePatterns Peroxidases proximal heme-ligand signature. 144 154 IPR019793 -
Seca5g04029 284 Gene3D - 27 94 - -
Seca5g04029 284 SUPERFAMILY Heme-dependent peroxidases 26 284 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Haem peroxidase superfamily signature 144 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 PRINTS Haem peroxidase superfamily signature 96 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 Pfam Peroxidase 43 90 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 Pfam Peroxidase 95 248 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca5g04029 284 ProSiteProfiles Plant heme peroxidase family profile. 26 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04029 Seca-Chr5 97583943 97586027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04029 14 284 Peroxidase AT2G18980 62.222 4.88e-140 395