Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04020 ATGGTTTCATTCAGCCACGCCTACAACAACATTTCACCTACTACCTGCCTTTTTCTCCATCTCTATGGTCTTCTTTATATTCTGCCTCTGCAATTCAAAACCAAACATACACTATCCAAAATGGATCCAAGCCTAAGCTACTACTTCACTGCCACTACAATTGGACTCTTTACTATAAGCTTACTCTCTCTATATCTTTTCCGTACCTTCAAGAGTACTTCTCAATGTAGAGAAGAAGCTCCATTAGTCTCAGGTGCTTGGCCTATACTCGGTCACCTTCCACTATTGAGTAGTTCCCAAAAAACCCATGTGACTTTGGGTACAATGGCTGATACCTATGGACCCATTTTCACCATCAAGCTAGGTTCCACAAAGGGTTTGGTAATTAGCAACTGGGAAATGGCTAAAGAATGTTTCACCACTAATGATGTAGCTGTCTCTTCTCGCCCTCAACTAATTGCAATTGACAATTTAACCTATAACCGAGCCTTGCTTGGTTTTGCACCTTATGGCCCTTACTGGAGGGAAATCCGCAAGATTACAACTTCAGAGTTCCTCTCCAATCACCGCATTGATTTGATAAGTCATGTTCTTGAGCCCATAGTCCAAACTTCTACCAAAAAGCTATTCCAGGTTTGGTCCAACAGAGAGGATAAAAATGAAAACTTTGTGTTGGTGGAGTTGATGACGTGGCTGGGTGAGTTGACATTCAACATTGTTCGCCAAATGGTTATAGGGAAGAAATGTTGTTTGTATGGTGATGATGAGGAGAGTGATGCTAGTAGGATTGTGAAAGGTTTGAGGGACTTGATGCATCATTTTGGGGTGTTTACTGTGTCAGATGCTGTTCCTCTTCTGAGATGGTTGGATTTGGGTGGGCATGAGAGAGCCATGAAAGAAACTACTAAGAAATGGGACATCATGTTAAGTGGTTGGTTAGAGGAGCACCGTCGGAAGTGGACTTCAAGGGAAGAAGTTAAAAGCGATCAAGACTTCATGGATGCGATTCTTTCCAGGATCGATGGCAGAATGATTCATGGGCATGATGCAGATTCTATCACCAAAGCCACGACCTTGGCACTGATTGCAGGATCAATTGACCCCACTACTGTTACCCTTACATGGGCAATGTCTTTGATGTTGAATAATCCTAGTACATTGCGAAAAGTAAAAGAAGAACTTCATTTCCAAATTGGAGTTGAGAGATTTGTAACTTATTCAGATTTAAATAAGTTAGTATATCTTCAAGCCGTAGTTAAAGAGACACTAAGATTATATCCAGCAAATCCACTCTTATCACCTCGTTCATTTACAGAGGATTGCATTATTGGTGGCTACTATGTCAAAAAAGGAACTCGACTAATTACAAATCTATGGAAGATACACACAGACTCTAATATTTGGTCAGATCCATTTGAGTTCAAGCCAGAAAGGTTCCTTACCACCGATAAAAATGTTGATGTTAAGGGCCACCATTTTGAATTATTTCCATTTGGAAGCGGTAGAAGGATGTGTCCTGGAATCTCCTTCAGCCTTCGAATTATTCATTTGATTCTAGCGAATTTTCTACACTCCTTTGATATTTCAGTTCCATCAAGTGAAACTATTGATATGACTGAATCCGTTGGATTAACCAACACTAAAGCTACTCCGCTTGAGGTGCTTATTAAGCCACGTTTGTCTCCTAGACTCTATGAAAAGTAA 1704 0.4049 MVSFSHAYNNISPTTCLFLHLYGLLYILPLQFKTKHTLSKMDPSLSYYFTATTIGLFTISLLSLYLFRTFKSTSQCREEAPLVSGAWPILGHLPLLSSSQKTHVTLGTMADTYGPIFTIKLGSTKGLVISNWEMAKECFTTNDVAVSSRPQLIAIDNLTYNRALLGFAPYGPYWREIRKITTSEFLSNHRIDLISHVLEPIVQTSTKKLFQVWSNREDKNENFVLVELMTWLGELTFNIVRQMVIGKKCCLYGDDEESDASRIVKGLRDLMHHFGVFTVSDAVPLLRWLDLGGHERAMKETTKKWDIMLSGWLEEHRRKWTSREEVKSDQDFMDAILSRIDGRMIHGHDADSITKATTLALIAGSIDPTTVTLTWAMSLMLNNPSTLRKVKEELHFQIGVERFVTYSDLNKLVYLQAVVKETLRLYPANPLLSPRSFTEDCIIGGYYVKKGTRLITNLWKIHTDSNIWSDPFEFKPERFLTTDKNVDVKGHHFELFPFGSGRRMCPGISFSLRIIHLILANFLHSFDISVPSSETIDMTESVGLTNTKATPLEVLIKPRLSPRLYEK. 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04020 567 PANTHER CYTOCHROME P450 82C3-RELATED 60 565 - -
Seca5g04020 567 PRINTS E-class P450 group I signature 495 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS E-class P450 group I signature 373 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS E-class P450 group I signature 110 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS E-class P450 group I signature 505 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS E-class P450 group I signature 134 155 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS E-class P450 group I signature 457 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 FunFam Cytochrome P450 82C4 70 557 - -
Seca5g04020 567 Pfam Cytochrome P450 85 544 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 SUPERFAMILY Cytochrome P450 86 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS P450 superfamily signature 364 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 PRINTS P450 superfamily signature 496 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g04020 567 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 498 507 IPR017972 GO:0005506|GO:0016705
Seca5g04020 567 CDD CYP82 114 559 - -
Seca5g04020 567 Gene3D Cytochrome P450 66 558 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04020 Seca-Chr5 97480273 97485781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04020 80 565 Cytochrome P450 AT4G31940 46.774 1.08e-160 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04020 - - gmx:100805047 628.246