Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g04008 ATGAGGTTGTTGGTGGAGTTTGGGTGTGTATTTATAATTCTATTTGAGCTTTTACTATCTGGTAAGGCAGAGGTTTACATAGTAACCGTTGAAGGTGAGCCTATCATAAGTTACACGGGCGGTGTCGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGACAAGATTGATACCACAAGTGAATCCGTCATTTCTTATGCTCGCCACCTTGAAAGTAGACATGATATGCTTCTGGGGATGATGTTTGACAGTGGGACATACAAGAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTTCATCTTTCACCAGAGCAGGCAGAAACTCTTAGACATGCTCCTGGTGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAGACTTACAACACATACCCCACAGTTTTTGGGGCTTCCAACTGGTGTATGGCCAACAGGAGGTGGTTATGATCGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATCTATCCTCACCACCCAAGCTTTTCGAGTCATAATACAGAACCATATGGGCCAATTCAAAAATATAGAGGAAAATGTGAAGTTGATCCTAACACTAAAAGAAGTTTCTGTAATGGGAAGATTATTGGAGCACAACATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTTCAATTGATTTTGCATCTCCTCTAGATGGGGATGGCCATGGAAGTCATACAGCCTCTATTGCAGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCCCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTGTTTGGAGGATTTATTGCAGATGTAGTTGCTGCACTTGATCAGGCTGTACATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCAAACAGTCCACCAGCAACCACCAAAACCACGTTTTTGAATCCTTTTGATGCTACATTACTCGGAGCCGTGAAAGCTGGTGTATTTGTTGCACAAGCTGCTGGAAATGGTGGTCCTTTTCCTAAGACATTAGTTTCATATAGTCCATGGATAGCATCTGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATTTGATCCTTGGAAATGGGAAAATCTTAGCAGGAATTGGGTTGTCACCATGGTGTTGCCCAGCTTCTACACAATTAAACCAGACATACACATTGGTTGCTGCAAATGATGTGCTACTAGATTCATCAGTTACAAAGTTCAGCCCCGCAGATTGCCAGAGACCAGAAGTTTTAAACAAGAACTTGATAAAGGGGAATATTCTTCTCTGTGGCTATTCTTTCAACTTTGTTGTTGGTACTGCATCAATAAAGAAAGTCTCAGAAACAGCAAAGGCCCTTGGAGCAGTTGGATTTGTTCTTTGTGTAGAAAATGTTTCTCCTGGAACGAAATTTGATCCAGTCCCTGTTGGCCTTCCTGGGATTCTTATCACAGATGTCAGCAAGTCAAAGGAACTGATAGATTATTATAATATCTCCACACCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAAGGTACAGGTAAAATTGAGGATGGTTTGATGCCTATTCTCCATAAATCTGCACCACAGGTAGCATTATTCTCTGCCAGAGGGCCAAATATAAAGGACTTTAGCTTCCAAGAGGCAGATCTTCTCAAACCAGATATATTAGCTCCGGGTTCATTGATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAGCCAAATTATGATGGAGAGGGATTTGCCATGATATCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATTGCTGCTCTTATAAAGCAGAAACATCCACATTGGAGCCCTGCTGCCATCAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGAAGTCCTATTCTAGCACAGCAATATTCTGAAACAGAAGCTGTGAAGCTGGTCAGAGCCACTCCTTTTGATTATGGGAGTGGACATGTGAACCCAAGAGCTGCCTTGGACCCTGGCCTCATCTTTGATGCAGGATACGGGGACTATTTAGGATTCTTGTGCACAACACCTGGCATTGATGTTCACGAGATAAAGAACTACACAAATTCGCCTTGTAACAATACCATGGGTCACCCATCGAATTTAAACACTCCATCAATTACAGTTTCCCATCTTGTAGGAACTAAAATCGTCACCCGCACAGTCACAAATGTTGGTGAGGAAGAAACCTACGTGATCACAGCCAGAATGCAACCAGCAATTGCCATTGAAGTCAATCCTCCAGCAATGACCATCAAAGCAGGTGCATCACGTAAGTTTTCTGTGACACTTACTGTTCGCTCAGTGACAGGAACCTATAGCTTTGGAGAGGTTTTAATGAAGGGAAGCAGAGGGCACAAAGTGAGGATCCCTGTTCTGGCCAATGGATACTCAAGATAG 2472 0.4337 MRLLVEFGCVFIILFELLLSGKAEVYIVTVEGEPIISYTGGVDGFEATAVESDDKIDTTSESVISYARHLESRHDMLLGMMFDSGTYKKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGYDRAGEDIVIGFVDSGIYPHHPSFSSHNTEPYGPIQKYRGKCEVDPNTKRSFCNGKIIGAQHFAQAAIAAGAFNPSIDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAALDQAVHDGVDILSLSVGPNSPPATTKTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKILAGIGLSPWCCPASTQLNQTYTLVAANDVLLDSSVTKFSPADCQRPEVLNKNLIKGNILLCGYSFNFVVGTASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILITDVSKSKELIDYYNISTPRDWTGRVKSFKGTGKIEDGLMPILHKSAPQVALFSARGPNIKDFSFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYDGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGSPILAQQYSETEAVKLVRATPFDYGSGHVNPRAALDPGLIFDAGYGDYLGFLCTTPGIDVHEIKNYTNSPCNNTMGHPSNLNTPSITVSHLVGTKIVTRTVTNVGEEETYVITARMQPAIAIEVNPPAMTIKAGASRKFSVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR. 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g04008 823 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 84 816 IPR045051 -
Seca5g04008 823 Pfam Fibronectin type-III domain 725 817 IPR041469 -
Seca5g04008 823 Pfam Subtilase family 155 644 IPR000209 GO:0006508|GO:0008236
Seca5g04008 823 Gene3D - 697 820 - -
Seca5g04008 823 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 160 171 IPR023827 -
Seca5g04008 823 FunFam Subtilisin-like protease SBT1.5 157 378 - -
Seca5g04008 823 CDD PA_subtilisin_like 377 520 - -
Seca5g04008 823 Gene3D - 370 540 - -
Seca5g04008 823 Gene3D Peptidase S8/S53 domain 157 693 IPR036852 GO:0004252|GO:0006508
Seca5g04008 823 Pfam Peptidase inhibitor I9 25 128 IPR010259 -
Seca5g04008 823 CDD Peptidases_S8_3 131 639 IPR034197 -
Seca5g04008 823 ProSitePatterns Serine proteases, subtilase family, serine active site. 603 613 IPR023828 -
Seca5g04008 823 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Seca5g04008 823 PRINTS Subtilisin serine protease family (S8) signature 155 174 IPR015500 -
Seca5g04008 823 PRINTS Subtilisin serine protease family (S8) signature 602 618 IPR015500 -
Seca5g04008 823 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 129 IPR037045 -
Seca5g04008 823 ProSiteProfiles Serine proteases, subtilase domain profile. 124 680 - -
Seca5g04008 823 SUPERFAMILY Subtilisin-like 130 684 IPR036852 GO:0004252|GO:0006508
Seca5g04008 823 SUPERFAMILY Protease propeptides/inhibitors 87 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g04008 Seca-Chr5 97265738 97274182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g04008 5 823 Subtilisin-like Serine Gene Family AT4G30020 80.512 0.0 1358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g04008 - - gmx:100784999 1504.19