Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03937 ATGGCCACGGGAGGCGCTCCTAAAGGACTATACCCTAATGACGGATGCTACCTGAATCGTGTGGATAATCCCAATCCTGTATGGAACAGTGAAAATTCCTTACTAATGAACTTTCCTGCCCTTATCGTCCAAATTTTCATTGTTGTCCTTGTAACTCGTTTGATATTCTGCATCCTCAAACTCATCAATCAACCTCATTTCGTTGCTGAGCTTCTTGCGGCTTTCATCATAAATATTCGTATATCTAGTCGAGACACGATTTTCCAGAATGCGCTACCTGTGAAGGGAATCCTAAGTTTTGAAACCATTGCACAATTGGGTCTCATCTATTATGTATTCATCACTGGCTTGGAGATGAACTTAGACATTGTCCTACGTGCACGAAAGAAGGCAACGAGCATTGCCATTGCTGGCACCTTCATTCCTATGGTTTTGGGGGTTGGAATATATTATGTGGTTCTACATGTCTATGGTGAAGTGTCACATTACAACACATCTAATGCTTATATATGTTGGGCTTTAGCTGTTGGTGTCACAAGTTTTCCCGTCCTTGCACACATCCTTGGGGACCTCAAGATCCTCTACACTGGGCTTGGTAGAGTGGCCTTAACAGCAGCCACTATTAATGACTTTTACAATTGGTCTCTGTTTGTGCTCTTGCTTCCATTTGCCGTTAATGGTCGAAATGGCATTTACTCAGTCATAGGCACCGTGATTTTCAGCCTTATCTGCTTCTTTGTGTTACGCCCTCCCCTAAGGCGGCTATTAACACATAAAACTGATAAAAATGAGTGGGATAATTATCAATTGTCATATGTGATCATGGGTATCTTTGCTTGTGCAACTGTTACTGAAATGCTTGGTACACACTCTGTTGTTGGGGCTTTGGTGTTTGGATTGATCCTTCCTCGTGGAAGGTTTACAGAAATGTTGATAGAGCAATCAGATGATATTGGATCTGGGTATCTGGCACCCTTGTTCTTTGCTAGCATTGGTGTCAGAACCAACACAAGTGATGTTATATCACATAAAGGTTTCACAATGTTTGCAGCAATCATGCTCTTGTTAGGCTCCACCAAGATTGTAAGCACTATAATAGCCACTCGCTTCTATGAAATGCCTGTAAGAGATAGTGTGGCTCTTGGAGTGCTTATGAACACCAAAGGCATCTTACCATTAATAGTGCTAAACGTTGCATGGAATAGGAAGATTTTGAGTCAGGAGTCCTTTACCATTATGGTGTACAGTATCTTTGTTATGACTGCAGTAGTGCCTCCTATCATCAACGCCATGTATAAGCCAAGAAGGACATATGAGCAAAATAAATTAAGGACTATTGAAAACTTGAAAGTTGATTCAGAAATCAGAGTTATGGTTTGTGTACACAACGCACGCCAAGCCAGTGGAATGATGAAAATCCTTGAAGCCTGCAGTGGCACTAATGTTTCCCCTTTACGTGTTTTTGCTCTTCAGCTTATTGAGCTCAAAGGACGTTCAACTGCCCTTCTAGTTGCTCGCATGGAGCAACCCAATTCCCACCAGAGTGGACCTGAAGCACTTACCAGATCAGAATCACACATGCAAGGCATTGCCTGCAATTTTGAAGAATTTGCATCTAACCATGAACAAATTTTTGTGGAGAATCTTGTTGCTATGTCATCCTATACAACTATTCATAAGGACATATACCATTTAGCATCAGAGAAACAAGCATCATTGGTTCTCCTTCCTTTTCAGAAACAGTCTAACTCAGAAGGTACTCTAGAGGAAACCAATACCTCATTCAAAGACATTAACCGGAATGTCATGCAAGATGCACCTTGTTCTGTGGGAATCTTTGTTGATCGTGGTCCTGAGACATTGTCCAAGACCAATTTGCACATTCTTGTTCTCTTCATTGGTGGGCCTGATGACCGTGAAGCCTTATCAATTGCTTGGAGAATGTCAAGGCATCATGGGACTCAGCTCTCAATGGTGAGGATTATTTTGTGTGGAAAGGCTGCAGAAGTAAATAAATCAACCTATAATGAAGCTCATGGGCTATTATCTGCGGTACTAGACAGTGGAAGGCAAAAAGAGTTGGATGAAGAATATGTAGGTTCATTTAGACTCAAGGCAGTGAACAATGAGGATTCCATAACTTATTCAGAGATGGAAGTGCACACTGGTGATGCTATAAATGAAGTCCTTAATGAACTAGACAAGGGAGGTTATGATTTGTACATTTTAGGACAAGGAAAAGGAAGGAACTCTTCATTATTGGAAAATTTATTGGAATGGAGTGACTGCCCTGAACTGGGAGTTATTGGGGACATTTTGGCATCCAATAGTTTTGGTTCAAGCTCTTCAATACTTGTTGTGCAACAATATGGTTTTGGGGGAATGGAATTTAAGGCTAATAATAACAACACTCAACCTTCCAACCAAGGGCGTTCAAGTGATGATGACATTGAGACCCTTTTTCCAAAGAAAGAGTGA 2478 0.412 MATGGAPKGLYPNDGCYLNRVDNPNPVWNSENSLLMNFPALIVQIFIVVLVTRLIFCILKLINQPHFVAELLAAFIINIRISSRDTIFQNALPVKGILSFETIAQLGLIYYVFITGLEMNLDIVLRARKKATSIAIAGTFIPMVLGVGIYYVVLHVYGEVSHYNTSNAYICWALAVGVTSFPVLAHILGDLKILYTGLGRVALTAATINDFYNWSLFVLLLPFAVNGRNGIYSVIGTVIFSLICFFVLRPPLRRLLTHKTDKNEWDNYQLSYVIMGIFACATVTEMLGTHSVVGALVFGLILPRGRFTEMLIEQSDDIGSGYLAPLFFASIGVRTNTSDVISHKGFTMFAAIMLLLGSTKIVSTIIATRFYEMPVRDSVALGVLMNTKGILPLIVLNVAWNRKILSQESFTIMVYSIFVMTAVVPPIINAMYKPRRTYEQNKLRTIENLKVDSEIRVMVCVHNARQASGMMKILEACSGTNVSPLRVFALQLIELKGRSTALLVARMEQPNSHQSGPEALTRSESHMQGIACNFEEFASNHEQIFVENLVAMSSYTTIHKDIYHLASEKQASLVLLPFQKQSNSEGTLEETNTSFKDINRNVMQDAPCSVGIFVDRGPETLSKTNLHILVLFIGGPDDREALSIAWRMSRHHGTQLSMVRIILCGKAAEVNKSTYNEAHGLLSAVLDSGRQKELDEEYVGSFRLKAVNNEDSITYSEMEVHTGDAINEVLNELDKGGYDLYILGQGKGRNSSLLENLLEWSDCPELGVIGDILASNSFGSSSSILVVQQYGFGGMEFKANNNNTQPSNQGRSSDDDIETLFPKKE. 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03937 825 Gene3D - 39 441 IPR038770 -
Seca5g03937 825 MobiDBLite consensus disorder prediction 800 815 - -
Seca5g03937 825 PANTHER CATION/H + ANTIPORTER 31 790 - -
Seca5g03937 825 Pfam Sodium/hydrogen exchanger family 46 430 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Seca5g03937 825 Gene3D - 485 768 - -
Seca5g03937 825 MobiDBLite consensus disorder prediction 800 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03937 Seca-Chr5 96454344 96458049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03937 16 790 Antiporter Super Family AT2G13620 35.842 1.43e-178 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03937 - - mtr:11442852 1025