Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03918 ATGTTTTTTGTTCTGGGTCGCGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAGCCGCCAAGCTTTCCCTCTTCCAACTCCACCAAGGTCTGAAGACGAGAGTTCAAAGCGTGAATCAGTAGAAGACAGCCCTGTGACACCTCCACTCAACAAGGAACGGCTACCTCGTAATTTATACCGCCCAACAGGGACAGGGATGGGAATGGGGTACTCATCCTCAGATTCTTTTGATCATCAGTCAATGCAATCTCGGCAGTACTATGATTCGAATGGCATGAACTCAACTCCAAAGGTGTCCACCATTAGTGCTGCCAAGACAGATATATCATCAATGGATGCTTCTATAAGAAGTAGCTCATCTAGAGAAGCTGATCGCTCTGGTGATCTATCAATCAGCAATGCCAGTGACCTTGATACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCTCTCCCTGGTGGCAAAAGGGAGCTCAGACGAGTCAGGTTCAGTCGAGAAAAATTTGGGGAGATGCATGCTAGAGTATGGTGGGAAGAGAATCGCGCCAGAATACATGAACAATACTTGTGA 639 0.4601 MFFVLGREIFNKWQAQRWWAENYDKVMELYNVQRLSRQAFPLPTPPRSEDESSKRESVEDSPVTPPLNKERLPRNLYRPTGTGMGMGYSSSDSFDHQSMQSRQYYDSNGMNSTPKVSTISAAKTDISSMDASIRSSSSREADRSGDLSISNASDLDTEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARVWWEENRARIHEQYL. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03918 212 ProSiteProfiles BRX domain profile. 157 212 IPR013591 -
Seca5g03918 212 PANTHER PROTEIN BREVIS RADIX-LIKE 1 7 212 IPR044532 -
Seca5g03918 212 MobiDBLite consensus disorder prediction 128 150 - -
Seca5g03918 212 MobiDBLite consensus disorder prediction 39 95 - -
Seca5g03918 212 ProSiteProfiles BRX domain profile. 1 31 IPR013591 -
Seca5g03918 212 Pfam Transcription factor regulating root and shoot growth via Pin3 157 211 IPR013591 -
Seca5g03918 212 Pfam Transcription factor regulating root and shoot growth via Pin3 7 30 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03918 Seca-Chr5 96261818 96265458 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03918 5 212 Major Intrinsic Protein MIP AT1G31880 46.635 4.01e-52 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03918 - - gmx:100794109 364.385