Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03878 ATGGGTTCTGTTACCGGCTTCTGCTTCCTCCTAGTTCTTCTTCTGTTACAATGTCTATCAGCATCATCTTCACCGCCCAAAAAGACATACATTGTTCACATGAAGCACCATGACAAGCCCTCCATCTACCCCACCCACCATGACTGGTACTCCGCAAGTCTCCAATCCCTTTCTATTTCCACCGATTCAGATTCCGATTCTGATCCCCTTCTTTACTCCTACACCACCGCCTACAGCGGTTTCGCTGCCTCCCTCGACGCTCAACAAGCCCAAACACTGCTTGGATCCGATTCGGTTCTCGATGTTTATGAGGACACACTTTACCAACTTCACACCACCCGCACCCCAGAGTTTCTTGGACTCGAAACTCAAACAGGCTTATGGGAAGGCCACAGAACCCAGGATTTGGACCAAGCTTCCCATGACGTTATCATAGGGGTGCTCGACACCGGAGTATGGGCCGAATCTGAGAGTTTCAACGACGCCGGAATGCCGGAGATTCCCTCCCGGTGGCGTGGCGAGTGTGAGAATGCTCCCGATTTCAACTCCTCTCTCTGCAACAGAAAACTCATCGGTGCAAGAAGCTTCTCCAGAGGGTTCCACATGGCCTCCGGCGGTTACGGGAAGAGGGAGAACGAGCCTGTCTCTCCACGTGACAGGGATGGCCATGGGACCCACACCGCGAGCACCGCCGCTGGCTCGCACGTGGCGAATGCTAGTCTTCTAGGGTACGCCAGTGGAACCGCTAGAGGCATGGCTCCTCAGGCGCGTGTTGCTGCATACAAGGTGTGTTGGACCGACGGTTGCTTCGCCTCCGACATTCTCGCCGGTATGGACCGCGCCATTCAGGACGGCGTTGATATTCTCTCGCTCTCCCTCGGTGGCGGCTCTGCTCCTTACTTCCGCGACACCATCGCCATCGGAGCGTTCGCGGCGATGGAGCGTGGGATCTTCGTTTCATGCTCCGCCGGGAACAGTGGCCCGAGCAGGGCCTCGCTTGCCAACGTGGCGCCGTGGATCATGACCGTTGGGGCTGGGACTCTGGACCGGGATTTCCCGGCTTACACGGTTCTTGGGAATAAGAAGCAGTTTTCAGGGGTTTCGCTTTACAGTGGTAAAGGAATGGGGAGTGAACCGGTGGGTTTGGTTTATAACAAAGGATCGAACCAATCCGGGAGTATATGCATGCCCGGTTCACTCGACCCGGCCGTGGTTCGTGGAAAAGTGGTGGTTTGCGACAGGGGACTCAATGCGCGTGTGGAGAAAGGTAAGGTCGTAAGGGATGCCGGTGGGATTGGGATGATACTGGCGAACACGGCGGCGAGTGGGGAGGAGTTAGTGGCGGATAGTCACCTGCTACCGGCTGTGGCGGTGGGGAGAATCGTGGGTGATCAGATCAGGGAGTATGCCTCAACGGATCCTAATCCAACGGCAGTTCTCAGTTTCCGTGGGACCGTTTTGAACGTTAGACCATCCCCAGTGGTGGCAGCGTTCAGTTCGAGAGGGCCCAATATGGTGACTAAGCAGATTCTAAAACCGGACGTTATTGGGCCTGGGGTTAACATCTTAGCAGGGTGGTCAGAAGCTATTGGGCCCTCTGGGTTGTCTTCAGACACTCGTAAAACAAAGTTCAACATCATGTCAGGTACGTCGATGTCTTGTCCACATATAAGTGGGTTGGCTGCATTGCTGAAAGCAGCCCATCCAGATTGGAGCCCGAGTGCAATCAAATCTGCACTTATGACAACAGCCTATGTCCATGACAATACCAAGTCGCCACTTCGTGATGCTGCGGGAGGGGCTTACTCAACTCCATGGGCTCACGGCGCTGGCCATGTGAACCCACAAAAAGCCCTCTCTCCTGGGCTTGTATACGATGCCTCAACCAGGGACTACATTGCGTTTTTGTGCTCCTTGGATTACAGCCCTGACCGCATACAACTCATTGCTAAACGACCTGGAGTCAATTGTACTAGGAGATTCTCTGATCCTGGGCAATTGAATTACCCATCCTTCTCGATCGTGTTTGATGGCAAGAGGGTCGTGAGATACACGCGCATCTTGACAAACGTTGGCGAGCCCGGCTCCATCTACAATGTGGTCGTGGATGGGCCCTCCACGGTGGACATAACGGTGAAACCCACCAAGCTTGTGTTTGGAAAAGTAGGAGAAAGGCGAAGGTACACGGTCACCTTTGTGTCCAAGAAGGGAGCTGAGGATTCTGTTAGGTCTGCATTTGGTAGCATTACGTGGAGCAATGCACAGCACCTAGTGAGGAGCCCAGTTGCTTTTGCTTGGACAGAGTTGTGA 2310 0.542 MGSVTGFCFLLVLLLLQCLSASSSPPKKTYIVHMKHHDKPSIYPTHHDWYSASLQSLSISTDSDSDSDPLLYSYTTAYSGFAASLDAQQAQTLLGSDSVLDVYEDTLYQLHTTRTPEFLGLETQTGLWEGHRTQDLDQASHDVIIGVLDTGVWAESESFNDAGMPEIPSRWRGECENAPDFNSSLCNRKLIGARSFSRGFHMASGGYGKRENEPVSPRDRDGHGTHTASTAAGSHVANASLLGYASGTARGMAPQARVAAYKVCWTDGCFASDILAGMDRAIQDGVDILSLSLGGGSAPYFRDTIAIGAFAAMERGIFVSCSAGNSGPSRASLANVAPWIMTVGAGTLDRDFPAYTVLGNKKQFSGVSLYSGKGMGSEPVGLVYNKGSNQSGSICMPGSLDPAVVRGKVVVCDRGLNARVEKGKVVRDAGGIGMILANTAASGEELVADSHLLPAVAVGRIVGDQIREYASTDPNPTAVLSFRGTVLNVRPSPVVAAFSSRGPNMVTKQILKPDVIGPGVNILAGWSEAIGPSGLSSDTRKTKFNIMSGTSMSCPHISGLAALLKAAHPDWSPSAIKSALMTTAYVHDNTKSPLRDAAGGAYSTPWAHGAGHVNPQKALSPGLVYDASTRDYIAFLCSLDYSPDRIQLIAKRPGVNCTRRFSDPGQLNYPSFSIVFDGKRVVRYTRILTNVGEPGSIYNVVVDGPSTVDITVKPTKLVFGKVGERRRYTVTFVSKKGAEDSVRSAFGSITWSNAQHLVRSPVAFAWTEL. 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03878 769 SUPERFAMILY Subtilisin-like 110 623 IPR036852 GO:0004252|GO:0006508
Seca5g03878 769 Gene3D Peptidase S8/S53 domain 142 632 IPR036852 GO:0004252|GO:0006508
Seca5g03878 769 FunFam Subtilisin-like protease SBT1.5 636 767 - -
Seca5g03878 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 111 IPR037045 -
Seca5g03878 769 ProSiteProfiles Serine proteases, subtilase domain profile. 124 619 - -
Seca5g03878 769 Pfam Fibronectin type-III domain 666 763 IPR041469 -
Seca5g03878 769 Pfam Subtilase family 141 588 IPR000209 GO:0006508|GO:0008236
Seca5g03878 769 CDD PA_subtilisin_like 357 478 - -
Seca5g03878 769 FunFam Subtilisin-like protease SBT1.5 142 361 - -
Seca5g03878 769 FunFam Subtilisin-like protease SBT1.9 18 111 - -
Seca5g03878 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Seca5g03878 769 Pfam Peptidase inhibitor I9 29 111 IPR010259 -
Seca5g03878 769 Gene3D - 636 766 - -
Seca5g03878 769 CDD Peptidases_S8_3 108 585 IPR034197 -
Seca5g03878 769 Pfam PA domain 403 466 IPR003137 -
Seca5g03878 769 MobiDBLite consensus disorder prediction 204 230 - -
Seca5g03878 769 Gene3D - 349 487 - -
Seca5g03878 769 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Seca5g03878 769 PRINTS Subtilisin serine protease family (S8) signature 219 232 IPR015500 -
Seca5g03878 769 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Seca5g03878 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 763 IPR045051 -
Seca5g03878 769 FunFam subtilisin-like protease SBT1.5 349 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03878 Seca-Chr5 95874720 95877732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03878 9 769 Subtilisin-like Serine Gene Family AT2G05920 68.635 0.0 1077
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03878 - - gmx:100797543 1274.23