Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca5g03857 | ATGAAGGCTCCTTCCAATGGTTACTTGCCTAATTCTGGCGAAGGGGAAAGGAAGACCATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCGTTGGTTTCATTACCTCCTGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGACACAGTGAACAAGTTGCAGCATCCATGCAAAAGGAGGCTGACTTCATACCGAGTTATCCTAACCTTCCATCCAAGTTGATTTGCATTCTTCACAATGTTGCCCTGCATGTAGGTGCACCTCCCTCATGTGCATGGCTGGCTGATCCTGAAACTGATGAGGTTTATGCACAGATGACCCTTCAGCCAGTAAATAAATATGACAAGGAAGCAATGATGGCATCAGACATGAGTCTCAAACAAAGCCAACAACCTACCGAATTCTTTTGCAAAACTCTTACAGCTAGTGATACAAGCACTCATGGTGGATTTTCTGTACCTCGTAGAGCAGCTGAGAAAATATTCCCCCCTCTGGATTTTTCCATGCAACCTCCAGCTCAGGAGATTGTTGCCAAAGATTTGCATGACACCACATGGACATTTAGGCATATTTATCGCGGACAACCAAAGAGGCATCTATTGACTACTGGTTGGAGTGTCTTTGTTAGCACAAAAAGGCTATTTGCTGGAGATTCAGTTCTTTTCATCAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAAGAGAGCTAACAGACAGCAGCCAGCACTATCTTCATCAGTAATATCCAGTGACAGCATGCATATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAACAGCCCGTTCACTATATTTTATAATCCAAGGGCCAGCCCCTCTGAATTTGTAATTCCAATTGCCAAGTATAATAAATCCTTGTTCACTCAAGTATCACTTGGAATGAGATTCAGAATGATGTTTGAGACTGAGGAGTCAGGTGTACGCAGATATATGGGTACAATCACTGGGATCAATGACTTGGATCCTGTCAGATGGAAAAATTCACAATGGCGCAATCTTCAGGTTGGATGGGATGAATCAACTGCTGGTGAGCGCCCAAGCAGAGTTTCAATTTGGGATATTGAGCCAGTAGTGACTCCTTTCTACATTTGTCCACCTCCATTTTTTAGGCCCAAGTTCCCCAAGCAACCAGGAATGCCAGAAGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCCATGCCTTGGCTTGGAGATGACCTTGGAATGAAGGATGCCTCAAATTCAATCTTTCCTGGTTTGAGTTTAGTGCAATGGATGAGCATGCAGCAGAATAATCAGTTCTCTGCTGCACAATCAGGGTTTCTGCCTCCATCCATGCTTTCATCTAATACACTGCATGGTAATCTTAACACTGATGATCCATCCAAGTTATTGAGCTTTCAAAACCCCGTCCTCTCTGCACCAAGTCTTCAATTTAACAAACCTAATTTACCAAACCAAGTCAATCAATTGCAACAGCCCCCAACGTCGTGGCCTCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGAAGCTGCAGTCATTATTGCAAACACCATTAAACCAGCTCCAGCAGCAGCAGCAGCAGCAAAGGCAACAACAACTGCCTGGACCACAAAACCTGCCACAGCCACAGCAACAACAACCCCAACTTCCTCAGCAGAGAGCACAGCAGCCACAACAACAGCAACAGTCTAATCAACACACCATTATGAATAATGGGACAGTTGCTTCTAGCCAGATTCCAAATCAGTGTGTACAGCAACCGGTATCCTATTCTCAGCTTCAGCAACAGCAATTACTCTCAGGAAGTATCTCACCCCAACAAAGTTTCCAATCGGCTGGTAAGAATACAATGCTAATGACATCCTTACCACAAGACTCACAATTTCAGCAACAGATAGACCAGCAAGCTACTCTCTTACAGAGGCAGCAGCAGCAACAGACACAGTTGCAACAATCTCCATTGCAGTTATTGCAACAAAGCCTGTCACAAAGGGCATCACAGCAACCACAAATGACTCAAATGTCACCGCAAAACAGCTCAGAGCAGCAACCACAGTTACAGTTGTTACAGAAATTGCAACAGCAGCAGCAGCAACTCCTGTCCACATCTAGCTCAAATTTGCAGTCTCAGCTTCTGCAGCAACAAAATTCTCACCAACAAAACCAGCAACTGCCGCAGCTGCCTCTATCTCAGCATCAGCCTCAACAGCTTGGCAACAATGCATTCTCAATGGACAGGCTTCTCAACAACAACTTCTCTTCTTCAGCTCTGATGCAATCACAGCAGCTTCCTGTAAGCCAACCGCAGCATACACAGAAATCACCAACTTATACTAGAGCTCCCTCTACTCTTACAGATGCAGATGCCCCATCATGCTCAACTTCTCCATCTACTAATAACTGCCAGATGTCTCCTCCAAACCTCCTGAAAAGAAATCAACAAGTAACAGTCACATTAGGGGGGACTTCGGTAGTTGAACCAACCAATAATCTAATACAGGAGCTTCAGACTAAGTCTGACATGCATATCAAACATGAATTAGCCAGTGTAAAAGGACCTGACAAGCTAAAGTATAAAGGGACAATTACTGATCAGCTGGAAGTTTCTTCTGGAACACCTTACTGTATTGATCCTGGTAATATCCACCAGAACTTCCCACTTCCCAGCTTCTGCATGGATGCGGATGTCCAATCACATGCAAGAAATAATCTACCATTTGCCTCTAATCTCGATGGATTAACACCTGATACTTTGCTCTCAAGGGGGTATGACTCTCAAAAAGATCTTCAAAACTTGCTGTCTAATTATGGTGGTGGTCCAAGAGACATTGAAACTGAGCTGTCCACTGCTGCCATTAGTCCACAGTCATTTGGTGTGCCAAACATGCCTTTTAAACCAGGATGCTCAAGTGATATTGCCATCAATGATACTGGGGTTTTGAATAATGGCTTGTGGGCTAATCAAACTCAACGAATGCGAACATATACTAAGGTTCAAAAATGTGGCTCTGTTGGAAGATGTATTGATGTCACCCGATACAAGGGATATGATGAACTTCGGCATGATTTGGCTCGTATGTTTGGGATTGAAGGGCAGCTAGAAGATCCTCTAAGGACTGAGTGGAAACTAGTATATGTGGATCATGAAAATGACATTCTTCTTGTTGGTGATGACCCTTGGGAAGAATTTGTAAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAGGTACAACAAATGAGCTTGGATGGGGATTTAGGTCATGTTCCAATCCCCAATCAAGCTTGTAGTGGGACAGAAAATGGCAATGCATGGAGAGGACAGTATGATGATAACTCTGCAGCCTCATTCAATAGATAA | 3381 | 0.4392 | MKAPSNGYLPNSGEGERKTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICILHNVALHVGAPPSCAWLADPETDEVYAQMTLQPVNKYDKEAMMASDMSLKQSQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPIAKYNKSLFTQVSLGMRFRMMFETEESGVRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPFFRPKFPKQPGMPEDESDIENAFKRAMPWLGDDLGMKDASNSIFPGLSLVQWMSMQQNNQFSAAQSGFLPPSMLSSNTLHGNLNTDDPSKLLSFQNPVLSAPSLQFNKPNLPNQVNQLQQPPTSWPQQQQQQQQQQQKLQSLLQTPLNQLQQQQQQQRQQQLPGPQNLPQPQQQQPQLPQQRAQQPQQQQQSNQHTIMNNGTVASSQIPNQCVQQPVSYSQLQQQQLLSGSISPQQSFQSAGKNTMLMTSLPQDSQFQQQIDQQATLLQRQQQQQTQLQQSPLQLLQQSLSQRASQQPQMTQMSPQNSSEQQPQLQLLQKLQQQQQQLLSTSSSNLQSQLLQQQNSHQQNQQLPQLPLSQHQPQQLGNNAFSMDRLLNNNFSSSALMQSQQLPVSQPQHTQKSPTYTRAPSTLTDADAPSCSTSPSTNNCQMSPPNLLKRNQQVTVTLGGTSVVEPTNNLIQELQTKSDMHIKHELASVKGPDKLKYKGTITDQLEVSSGTPYCIDPGNIHQNFPLPSFCMDADVQSHARNNLPFASNLDGLTPDTLLSRGYDSQKDLQNLLSNYGGGPRDIETELSTAAISPQSFGVPNMPFKPGCSSDIAINDTGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGHVPIPNQACSGTENGNAWRGQYDDNSAASFNR. | 1127 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca5g03857 | 1126 | CDD | B3_DNA | 135 | 227 | IPR003340 | GO:0003677 | |
| Seca5g03857 | 1126 | SMART | B3_2 | 136 | 238 | IPR003340 | GO:0003677 | |
| Seca5g03857 | 1126 | FunFam | Auxin response factor | 134 | 238 | - | - | |
| Seca5g03857 | 1126 | SUPERFAMILY | CAD & PB1 domains | 1013 | 1077 | - | - | |
| Seca5g03857 | 1126 | FunFam | Auxin response factor | 299 | 371 | - | - | |
| Seca5g03857 | 1126 | FunFam | Auxin response factor | 994 | 1088 | - | - | |
| Seca5g03857 | 1126 | Gene3D | - | 299 | 370 | - | - | |
| Seca5g03857 | 1126 | MobiDBLite | consensus disorder prediction | 1106 | 1126 | - | - | |
| Seca5g03857 | 1126 | MobiDBLite | consensus disorder prediction | 480 | 571 | - | - | |
| Seca5g03857 | 1126 | Pfam | Auxin response factor | 262 | 344 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca5g03857 | K14486 | - | gmx:100804628 | 904.049 |
Showing 1 to 1 of 1 entries