Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03843 ATGTCCAAAGGTGGAAAACTAACGAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCCTTCAGTAACAGTAACAGCAAGCACAGCCGCGCCACCATCAGCGCCGTCGCCAACGACGGCGACTCTCCATCCGGATCGGAACTCTGCCCTGTTTTCGTCGGCAAGAAGCGGCGGAGATACCTCGTGAGCTCCGTCGTTGTTGGACACCCGCTCTTCCGGGAGCTGGTGGATAGGTCTCGCGAACCTTCTGATGAGAACGACGATGATGACACCATCAACGTGGCATGCGAGGTTGTTCTGTTCGAACACCTTCTCTGGATGCTTGAGAACGCTGATCCTCAACCTGAATCGCTGGATGAACTCGTCGAGTTCTACGCATGTTGA 381 0.5407 MSKGGKLTKLKSVLKKWNSFSNSNSKHSRATISAVANDGDSPSGSELCPVFVGKKRRRYLVSSVVVGHPLFRELVDRSREPSDENDDDDTINVACEVVLFEHLLWMLENADPQPESLDELVEFYAC. 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03843 126 Pfam Auxin responsive protein 15 107 IPR003676 GO:0009733
Seca5g03843 126 PANTHER EXPRESSED PROTEIN 22 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03843 Seca-Chr5 95431229 95431609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03843 6 109 Calmodulin-binding Proteins AT5G20810 25.758 2.65e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03843 - - mtr:25486572 178.718