Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03786 ATGGGGAACGATTATTTGGTACATTTGGTGGTGTTGTTTTCCTTGGGGATGCTTGTAACTTGCTTCTGCCAAGGTGATTCAGATGATGCTACTACGGCTGTGTATGTTGTTACTCTGAGACAAGCTCCTTCTTCTCATTACTATGGTGAGTTGAAAACTGTGGATAACGGCTTCAAACATGATGCTTCTAGGAGAACCCAATTTCAGAAACCAAGATATGACAATGGTACAAAGACAGATAAGAGATATGGTTCTTACATTTCCCAAGTTCATGATTCTTTGTTAAAGAAAGTGTTGAATGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTTGCTGTGTTGGTTACCCAACAGCAGGCAGAGAAACTATCAAGGAGCAGTGAAGTGTCCAATGTGGTTTTGGATTTTCCTGTAAGAACTGCAACTACCCATACACCCCAATTTTTGGGTCTGCCACAGGGAGCATGGTCTCAAGATGGTGGGTTTGAAACTGCTGGAGAAGGAATTGTTATTGGGTTTATTGACACTGGCATAGATCCAACACATCCTAGTTTTGGTGATAGTAAATCAGAACATCCATATCCTGTTCCTTCTCATTATTCTGGCATCTGTGAGGTTACTCGGGATTTTCCATCTGGTTCTTGCAATAGGAAACTTGTTGGGGCCCGTCATTTTGCAGCATCTGCTATAACCAGGGGAATATTTAATTCATCTCAGGACTATGCTTCTCCATTTGATGGCGATGGCCATGGCACGCATACAGCATCTGTTGCAGCAGGAAACCATGGTATTCCAGTGATTGTTGCTGGGCATCACTTTGGGAATGCTAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTATACAAAAGCTTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGACCAGGCAGCTCAGGATGGGGTTGACATTATAAGCTTGTCAATTACTCCTAATAGGCGTCCTCCAGGTGTTGCAACTTTCTTCAATCCAATAGACATGGCATTGCTGTCAGCTGTAAAAGCTGGTATTTTTGTAGTGCAAGCTGCAGGAAATACTGGACCATCACCAATGAGCATGTCCTCCTTCAGTCCATGGATCTTTACTGTTGGTGCTGCCTCCCATGACCGGGTTTATAGCAATTCCATATTTCTTGGAAATAATGTAACCATACCTGGAGTTGGACTTGCACTTTCCTCAGCTGGCACAAAAGAAAACAAACTTTATAAGCTAATTCATGCTCACAATGCTTTGAACAATGACACAACGGATGGAGATGATATGTATGTTGGTGAGTGCCAAGATGCAAGTAAGTTCAATCAGGATTTGATCCAGGGAAACCTCTTGATCTGCAGCTATTCAATTCGATTTGTGCTGGGGATATCCACTATCAAGCGGGCCTCAGAAACAGCCAAGAACCTTAGTGCAGCTGGCGTTGTCTTCTATATGGATCCTTATGTGATTGGTTTTCAGCTTAACCCAGTTCCAATGAAAATACCCGGCATCATAATTTCATCCACAAATGACTCCAAGATTTTAATGCAATACTACAATTCTTCATTGGAAATAGATGCAGTATCAAAGAAAGTTGTTAAATTTGGGGCTGTTGCCAGTATTTGTGGTGGACTAAAAGCAAACTATGGTAATGCTGCCCCAAAGGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAGTCTTCCTCATCAAGCTGACATTTTGAAACCTAACTTGTTAGCTCCTGGAAATTTTATATGGTCTGCTTGGAGTTCTCTTGGAACTGATTCAGTTGAATTTCTAGGTGAGAATTTTGCAATGATGTCTGGCACAAGTATGGCTGCACCACATGTTGCTGGTCTTGCTGCGCTTATTAGGCAAAAGTTCCCCAATTTCAGTCCTGCAGCCATTGGATCTGCACTTTCTACTACTGCTTCTCTGTATGACAGGAGTGGCGGGCCAATAATGGCTCAGCGATCATATGCCTCTCCCGATCTAAACCAATCTCCGGCAACTCCTTTTGACATGGGAAGTGGATTTGTTAATGCAACTGGGGCATTGAATCCGGGTTTGATTTTTGATTCCAGTAAGTCACTCAAGCTTTTCAATCATCATAGTTATGATGATTACATGTCATTTTTGTGTGGTATCAATGGTTCAGCTCCTGTGGTGCTAAACTTCACTGGTCAAAATTGTTGGCTTTATAATTCTACTGTATATGGTCCTGATCTGAACTTGCCTTCAATCACTGTATCAAAGCTAAACCAATCTAGAGCAGTGCAGAGGACTGTCCAAAACATTGCAGAAAATGAAACTTACAGTGTTGGTTGGGATGCACCATATGGGGTTTCAGTGAAAGTATCTCCAACTCACTTCTCTATTGCCAATGGTGAGAAGCAGGTCTTGTCTGTACTCTTGAATGCAACCCTCAACAGTACTGTTCCCAGCTTTGGGAGGATTGGGTTGTTTGGTAATCAAGGTCATGTTGTTAGCATTCCTCTTTCAGTCATGCTTAAAATCTCAAATAACATCACTATGAGCTCTAACAGGGGATAG 2589 0.4226 MGNDYLVHLVVLFSLGMLVTCFCQGDSDDATTAVYVVTLRQAPSSHYYGELKTVDNGFKHDASRRTQFQKPRYDNGTKTDKRYGSYISQVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQQQAEKLSRSSEVSNVVLDFPVRTATTHTPQFLGLPQGAWSQDGGFETAGEGIVIGFIDTGIDPTHPSFGDSKSEHPYPVPSHYSGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSSQDYASPFDGDGHGTHTASVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQAAQDGVDIISLSITPNRRPPGVATFFNPIDMALLSAVKAGIFVVQAAGNTGPSPMSMSSFSPWIFTVGAASHDRVYSNSIFLGNNVTIPGVGLALSSAGTKENKLYKLIHAHNALNNDTTDGDDMYVGECQDASKFNQDLIQGNLLICSYSIRFVLGISTIKRASETAKNLSAAGVVFYMDPYVIGFQLNPVPMKIPGIIISSTNDSKILMQYYNSSLEIDAVSKKVVKFGAVASICGGLKANYGNAAPKVMYYSARGPDPEDSLPHQADILKPNLLAPGNFIWSAWSSLGTDSVEFLGENFAMMSGTSMAAPHVAGLAALIRQKFPNFSPAAIGSALSTTASLYDRSGGPIMAQRSYASPDLNQSPATPFDMGSGFVNATGALNPGLIFDSSKSLKLFNHHSYDDYMSFLCGINGSAPVVLNFTGQNCWLYNSTVYGPDLNLPSITVSKLNQSRAVQRTVQNIAENETYSVGWDAPYGVSVKVSPTHFSIANGEKQVLSVLLNATLNSTVPSFGRIGLFGNQGHVVSIPLSVMLKISNNITMSSNRG. 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03786 862 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 100 846 IPR045051 -
Seca5g03786 862 Gene3D Peptidase S8/S53 domain 174 707 IPR036852 GO:0004252|GO:0006508
Seca5g03786 862 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 177 188 IPR023827 -
Seca5g03786 862 Gene3D - 387 558 - -
Seca5g03786 862 CDD PA_subtilisin_like 396 531 - -
Seca5g03786 862 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 146 IPR037045 -
Seca5g03786 862 PRINTS Subtilisin serine protease family (S8) signature 620 636 IPR015500 -
Seca5g03786 862 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
Seca5g03786 862 PRINTS Subtilisin serine protease family (S8) signature 252 265 IPR015500 -
Seca5g03786 862 Gene3D - 725 849 - -
Seca5g03786 862 SUPERFAMILY Subtilisin-like 147 702 IPR036852 GO:0004252|GO:0006508
Seca5g03786 862 CDD Peptidases_S8_3 147 657 IPR034197 -
Seca5g03786 862 ProSiteProfiles Serine proteases, subtilase domain profile. 152 698 - -
Seca5g03786 862 Pfam Fibronectin type-III domain 754 847 IPR041469 -
Seca5g03786 862 Pfam Peptidase inhibitor I9 34 147 IPR010259 -
Seca5g03786 862 Pfam Subtilase family 172 663 IPR000209 GO:0006508|GO:0008236
Seca5g03786 862 ProSitePatterns Serine proteases, subtilase family, serine active site. 621 631 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03786 Seca-Chr5 94933921 94941935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03786 9 853 Subtilisin-like Serine Gene Family AT4G20430 68.845 0.0 1187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03786 - - gmx:100796456 1476.46