Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03769 ATGGAAGACGGTGACATTGAAGGCGGCGGAGAAGACGGTGGTTTTCGCTCACCGATCGGTCGCAAGTATCGTCCTGTGCTGGCGAACGATCGTGCTGTGCTCGAGATGTCTTCCATGGATCCGGGATCTTCTTCTTCGTCTTCTACTTCTGCCTTTCCAGATCAACCTCCTAATCTCAGAAAAATAAATGTAAGTAAGAGTGCGAATGGGAGTTCAGATGCTAAAGAAGGAAACTCTCTTCATCAATCACAACCTAATGGACCCCAGCAGGAATCTAAACTGGAACTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGTCTCAAAAGCATGACTGGTGAGCAAGCTGCACCACCGCATAGTCCTAGAGATGGTGAGGATATTACAATCACTCAGGGGCTGCCAAAGCCTGCTGCTCCCAAACTGGGTACAATGATGGGTGTATTCATTCCATGTGTACAAAGCATTTTGGGCATCATCTACTACATTCGTTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGACATTGTTGCTTGTTGCTCTTTGTGGCACTTGTACATTTCTTACTTCAATATCATTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATAGGTCGTGCTCTTGGTCCAGAAGTCGGAGTTAGCATTGGTCTATGCTTCTTCCTTGGAAATGCAGTTGCTGGAGCACTCTATGTATTAGGAGCTGTAGAAACATTTTTGAAAGCGGTTCCTTCTGCTGGGATTTTTAGAGAGACTATCACACAAGTTAATGGTACTGCAATTGCGCGACCAATAGAGAGTCCAAGTTCACATGACCTGCAAATTTACGGGATTGTTGTGACTATTGTGTTATGCTTTGTTGTATTTGGAGGAGTGAAGATGATAAATCGGGTTGCGCCTGCTTTTCTCATACCTGTTTTATTCTCGCTCATCTGCATATATTTGGGAATTTTTTTGGCAAGGCATGATCATCCCGCAGGTTTGTTTTATTCTCACTGTTGA 1029 0.4441 MEDGDIEGGGEDGGFRSPIGRKYRPVLANDRAVLEMSSMDPGSSSSSSTSAFPDQPPNLRKINVSKSANGSSDAKEGNSLHQSQPNGPQQESKLELFGFDSLVNILGLKSMTGEQAAPPHSPRDGEDITITQGLPKPAAPKLGTMMGVFIPCVQSILGIIYYIRFSWIVGMAGIGETLLLVALCGTCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPSAGIFRETITQVNGTAIARPIESPSSHDLQIYGIVVTIVLCFVVFGGVKMINRVAPAFLIPVLFSLICIYLGIFLARHDHPAGLFYSHC. 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03769 342 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 82 330 IPR004842 GO:0006811|GO:0015377|GO:0016020
Seca5g03769 342 MobiDBLite consensus disorder prediction 38 91 - -
Seca5g03769 342 Pfam Amino acid permease 147 327 IPR004841 GO:0016020|GO:0055085
Seca5g03769 342 MobiDBLite consensus disorder prediction 1 91 - -
Seca5g03769 342 Gene3D Amino acid/polyamine transporter I 140 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03769 Seca-Chr5 94689874 94697231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03769 142 334 Inorganic Solute Cotransporters AT1G30450 82.902 2.15e-110 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03769 K14427 - gmx:100780371 545.043