Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03707 ATGATCATGGGATACCAAAAGGCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTCGTGGGGTGCTCTTACCATGAGAATGCAAAAAAGAATGAAAAGAACATTTGCTGCTTAGATTGTTGCATAAGTATTTGCCCCCATTGCTTACCATCCCATCGCTTCCATAGGCTTCTTCAGGTTCGCCGCTACGTTTATCATGATGTTGTCAGATTGGAAGATCTTGACAAACTCATAGACTGCTCTAACGTCCAGGTAGCGTATACCATCAATAGTGCGAAGGTGGTGTTCATCAAGAAGAGACCTCAAAATCGGCAATTCAAAGGGTCAGGAAACTATTGCACTTCATGTGATAGAAGTCTCCAAGAACCTTTTATCCATTGCTCTCTAGGATGCAAGGTGGATTTTGTGGTGAAACACTACAAGGATCTATCTCCCTATTTGAGAACATGCAAGACCTTGCAGCTAAGTCCTGATTTCCTAATGCCACAAGAGATGGGGGATGATGAGCCAATGAGTTCATCTTCTTCAGGGTCAGAGAACATGATGAGCATGGCTTGCACTTCAGAGATTGTGAGGAAGAGGAGGAGTGGGTGGAATGTGTGTGCAAGATTAATGGCTAATAACAAGGTTTCAGATGAAGACATGGCTACCAGCATGAGTAGAAGGAAAGGCATCCCTCACAGATCTCCATTGTGTTAG 702 0.4345 MIMGYQKAAWLEALYTEKFFVGCSYHENAKKNEKNICCLDCCISICPHCLPSHRFHRLLQVRRYVYHDVVRLEDLDKLIDCSNVQVAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVVKHYKDLSPYLRTCKTLQLSPDFLMPQEMGDDEPMSSSSSGSENMMSMACTSEIVRKRRSGWNVCARLMANNKVSDEDMATSMSRRKGIPHRSPLC. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03707 233 MobiDBLite consensus disorder prediction 214 233 - -
Seca5g03707 233 Pfam PLATZ transcription factor 62 134 IPR006734 -
Seca5g03707 233 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03707 Seca-Chr5 94052016 94053688 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Seca5g03707 PLATZ 9.4e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03707 - - aprc:113874770 424.861