Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03695 ATGGCGTTTGATCAAAACTCCAGCGCCAACGATATGCGGCCACCACCGACTGTGGTCCGAACTGTACCCGAAGAGCCACTCGTTTTGCCGGCGAGTACGACGGCGGTTAATGGAGCTTCCGGTGCGATGCCCCTTTTCTACCCTGCCTCTGTCTCTGATGCTGGCATGGTAGGAATGGGGCATGGAAATGTGGCTTCGGGTGCTGCTCCTACCACCTGGTGCGTTCGCCCTGCTGTGCCCATTCGTCATCCCACTGTGAACCCTGCTGCTGCGTTTAGTCATGCTCCTAGTTTCCCCAATCGGGTTGTTGGTGGCAATGCTGTTGATCTTTCGGGTAGCTTTGTGGCTACTGCTCATGGTTATCCTCTGAATTTGGGCAACTGGGTTACTGGTAATGCCTTGGATAATGGTCTTCAGGGCAATAGCAGAGTCGTTGGCAATGCCAGTGATCATGCTGGTGGTGGTGCTTTGGGTGGAAATGGTGTCAATCCCCCTGCAAGCCAGCGGGGTGATCAGGCAAGTGAAGAGGGCGGAGGGGATGATTCAGTGTCTGGGCGAAAATTGAAGATTATGTGTAGTTATGGTGGTAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGAGGGCAGACGAGGATCATAAGTGTTAAGAGAGATGTGAGATTTAATGATTTGGTGCAAAAGATGGTGAATATTTTTGGGCAACCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGGTCTCGGTTTCCTGCCCTGAAGATCTGGAGAATATGATGGAGGAGTATGAAAGGTTAATTGAGAGGTCTCCTGATGGTTCTCCTAAATTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTGTGGTACAGTTTGTAAATTTACAAGATGGTGGGCAGAGATATGTTGAAGCTGTGAATGGAATTACTGATGGGATTGGTGGTAAACTCACAAGGAAAGGGAGCATTACAAGTGCAGCTTCTACACAAAATTCTGATTTGAGTGGAGTAGAGGCTCTTGATAACTCAAATGCTGTCCAAGGGGATGTCAGTGGGGCACCTGTGTCCAGTGCTTTATCACCTGAGGGGAATGTTGCTGCTTCACATGATGCTACTGCAAATTTTGTGGTTTCTGAGCCTGTTGCATCAATTTACTCAGATGCTTCTGCGGTTTCATTGGGCATACCTGTGACTAATTCTGGTCCAACTCAAGCTCCACCTTTCCAGAATGAGGTTGAGTTAGAGAAGTCTGTGCCCATTACTTTGTCTCAGCAGCAATTTGGGTTGCAGCAGTCTGGAATGGAAATTCCACCACCTGCACCTCTTCAGGCTTTTGTTGATCCTCGACAAGAAGTTATGAACCATGCGGATTATGTCCAGCTGCCTCCCCATATGGGATTCCCGAATCCTCAGCTCTTAGGTAAGCCTGGATCTATCTACTCCCAACATCAGTTCCATGATAATTCTCCTCGTTTAGCGTCCCATCAGGTAATCCCTGCAGTGCAAATGACAATGACTCAGCCATCTTCTCATGCTGGTGTAAGACCGAGTGTTATTCAACCACAAACATTCATGCAACTCCAGCAAAACCATTTGAACCAATATAATGATGAAAATACTTCAGGGCTAAGGATTCACCAGCTTCCTCCTGAACAAAGTTACAATGCATATCCAGTTCAATTCCCTTATGGAGGTAATTATGGTTGGGTCCAGGTTTCTCCACCAGAGCATGTCATTTTTCCTGATGCACTATTATCTCAACAACCAGCAATGATCCCTGAGAAAGTCCAAAGAGTGGAGGACTGTTATATGTGTCAGAAAAAACTGCCTCATGCACATTCAGATCCAGTTGTGCAGGATCAGCAAAATAGCTGTGCAGGTCCAATTGCTGATTCAATCCCAAATTACCATAGTCTCCCTATGGAGGACAATTTAAGACCTCAAGCAACAAATAAGGTTTTGGTGACTGCACCAATGAAGGAAGGCAATGTTGAGCAAGCAGTTGGGACCAGGCCCAGGGTCATTAGCAAATTGGAACCTCCAGGTGTAGTACACTGTACTGACGCAACTGGACTTCCTCTGGAACCTGAAGGTGAGAGGATTTTTATAGTGGACAGGTCTGATCATCCCAGAAATGCAGCAGTTATCCAGGAAACAGTTGGAAGAACAGGTGAAAAACAGTCACCTAGTGATGGACTGGTAGGAACAGCGCCACTGTCTTTTCTAGATGATATTATGCGCCAGCAAGTGGCTCCAGTTGAAAACCGTGCTAAAGAGGACGTGGTTGTGAATAAACCTGTTAATAATGATATACCTTTAGTTGGTGGTACATCTATTGCAACTTCTGAGTGTATGGTTCAAGAATCTCCAACAGAATATACTAACAAACTTGCTAGCACTATTTCAAAAGCAGATGCTGTGGAAAATTGGATTAAACAAGACCTTCTCAAACCTATTGATGGAAGGATGGACACCCTCAAGATGGGCAATCCTGAATTTTTTGTAAATAATGATAGATTTGATTACAGCACTCAGCATGCTGTAGAGAAGAAAGGGGTAGTCTTTGATAACAACCTTGGCAGGTCAAAATTGATTGCTGATGCAAATCAAATTAATATGATGGAGGTGCTTCCTAGTTCTACTATAGAAATTTCACATGGGAATCATTCCAGGCCAGTGGAATATAATGAGGTTGCTCAACCGCCTGTTTGGGGTATTCCTGGATCAAATCCTCAATCAAAGAATGGAAACCATCAGAAGGATGATGCAGTTTTATCTTCAATTTCACCATCTGTTAGGTTTGGAGATGTGCAGGATTCTTCAAACTCACTCTTTAGCAATCAGGATCCCTGGAATGTACACGCTACCTACTTTCCACCACCTAGACCTAACAAAATTGCATTGAAGAAAGAGTATTCTTATAAGGATCAGCTTTGTGAGAATCTTGGCAACAGTGGGGAACAAAATTTAGAACCTCAATTGGATGATGGCCTCTACCAGACATTCAAACAAAATTTGACTCTAGAAGAAGCTCAATCTGCCAAGGAAGAACGACAGCTTCAAGCTGTTGCTGAAGGTTTAGCTGCTTCTGTTCTGAATTCAAGCACTTCTTCAAATCCTAGAGATGTGTCCCATTGTGAAAACATTGACAATGGAGATGTTCAAAATAATCTAATAGATATACAGTGTAAAGATAAAACTCAGGATGTCAAAAGCAAGGTCCCAGAGAAAGCAAATTTTGGCTTTCCAGCATCAGATGTTGGATCGTTGCAGGTTATAAAAAATTGTGACCTTGAAGAGCTGATAGAATTGGGTTCTGGGACCTTCGGGACTGTATATCATGGAAAATGGAGGGGTACTGATGTTGCAATAAAGCGGATTAACGATAGGTGTTTTGCTGGAAAGCCTTCTGAACAAGAGCGCATGAGAGCTGATTTTTGGAATGAGGCAGTCAAGCTTGCTGATTTGCACCATCCAAATGTGGTAGCTTTCTATGGTGTTGTGGTTGATGGTCCAGGAGGTTCTGTCGCAACTGTAACAGAGTATATGGTTAATGGTTCTTTAAGGAATTCCTTGCAGAAGAATGGGAGGAATCTTGATAAGCGCAAGCGTCTCCTGATTGCAATGGATGTGGCGTTTGGTATGGAGTACCTGCATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTGTCCAAAGTGAAATGCCAGACACTGATATCTGGTGGTGTGAGAGGAACTCTACCTTGGATGGCCCCAGAACTACTGAACGGGAGCAGTAGCCTAGTTTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCATGTGGGAGCTCCTCACTGGAGAAGAGCCATACGCTGATTTGCACTATGGGGCCATCATAGGTGGTATTGTGAACAACACTTTACGGCCTCCAGTTCCAGAATCTTGTGATCCAGAATGGAGACTGCTGATGGAGAGGTGCTGGTCATCAGAACCATCAGAAAGACCAAGCTTCACTGAGATTGCCAATGAGTTACGTTCCATGGCAGCCAAAATCTCTCCCAAAGTACAAAATCAACAGCAGCAACCTGCTTCCTCCCAGAGTCAAGTGCAGAAATAA 4197 0.4458 MAFDQNSSANDMRPPPTVVRTVPEEPLVLPASTTAVNGASGAMPLFYPASVSDAGMVGMGHGNVASGAAPTTWCVRPAVPIRHPTVNPAAAFSHAPSFPNRVVGGNAVDLSGSFVATAHGYPLNLGNWVTGNALDNGLQGNSRVVGNASDHAGGGALGGNGVNPPASQRGDQASEEGGGDDSVSGRKLKIMCSYGGKILPRPSDGMLRYVGGQTRIISVKRDVRFNDLVQKMVNIFGQPVVIKYQLPDEDLDALVSVSCPEDLENMMEEYERLIERSPDGSPKLRVFLFSASELDPSGVVQFVNLQDGGQRYVEAVNGITDGIGGKLTRKGSITSAASTQNSDLSGVEALDNSNAVQGDVSGAPVSSALSPEGNVAASHDATANFVVSEPVASIYSDASAVSLGIPVTNSGPTQAPPFQNEVELEKSVPITLSQQQFGLQQSGMEIPPPAPLQAFVDPRQEVMNHADYVQLPPHMGFPNPQLLGKPGSIYSQHQFHDNSPRLASHQVIPAVQMTMTQPSSHAGVRPSVIQPQTFMQLQQNHLNQYNDENTSGLRIHQLPPEQSYNAYPVQFPYGGNYGWVQVSPPEHVIFPDALLSQQPAMIPEKVQRVEDCYMCQKKLPHAHSDPVVQDQQNSCAGPIADSIPNYHSLPMEDNLRPQATNKVLVTAPMKEGNVEQAVGTRPRVISKLEPPGVVHCTDATGLPLEPEGERIFIVDRSDHPRNAAVIQETVGRTGEKQSPSDGLVGTAPLSFLDDIMRQQVAPVENRAKEDVVVNKPVNNDIPLVGGTSIATSECMVQESPTEYTNKLASTISKADAVENWIKQDLLKPIDGRMDTLKMGNPEFFVNNDRFDYSTQHAVEKKGVVFDNNLGRSKLIADANQINMMEVLPSSTIEISHGNHSRPVEYNEVAQPPVWGIPGSNPQSKNGNHQKDDAVLSSISPSVRFGDVQDSSNSLFSNQDPWNVHATYFPPPRPNKIALKKEYSYKDQLCENLGNSGEQNLEPQLDDGLYQTFKQNLTLEEAQSAKEERQLQAVAEGLAASVLNSSTSSNPRDVSHCENIDNGDVQNNLIDIQCKDKTQDVKSKVPEKANFGFPASDVGSLQVIKNCDLEELIELGSGTFGTVYHGKWRGTDVAIKRINDRCFAGKPSEQERMRADFWNEAVKLADLHHPNVVAFYGVVVDGPGGSVATVTEYMVNGSLRNSLQKNGRNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYADLHYGAIIGGIVNNTLRPPVPESCDPEWRLLMERCWSSEPSERPSFTEIANELRSMAAKISPKVQNQQQQPASSQSQVQK. 1399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03695 1398 SMART serkin_6 1108 1379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g03695 1398 CDD PB1_UP2 191 289 - -
Seca5g03695 1398 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1101 1195 - -
Seca5g03695 1398 PRINTS Tyrosine kinase catalytic domain signature 1298 1320 IPR001245 GO:0004672|GO:0006468
Seca5g03695 1398 PRINTS Tyrosine kinase catalytic domain signature 1342 1364 IPR001245 GO:0004672|GO:0006468
Seca5g03695 1398 PRINTS Tyrosine kinase catalytic domain signature 1227 1245 IPR001245 GO:0004672|GO:0006468
Seca5g03695 1398 PRINTS Tyrosine kinase catalytic domain signature 1190 1203 IPR001245 GO:0004672|GO:0006468
Seca5g03695 1398 SUPERFAMILY Protein kinase-like (PK-like) 1101 1370 IPR011009 -
Seca5g03695 1398 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1196 1388 - -
Seca5g03695 1398 Pfam Protein tyrosine and serine/threonine kinase 1113 1371 IPR001245 GO:0004672|GO:0006468
Seca5g03695 1398 ProSiteProfiles Protein kinase domain profile. 1108 1382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g03695 1398 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 207 291 - -
Seca5g03695 1398 ProSitePatterns Protein kinases ATP-binding region signature. 1114 1145 IPR017441 GO:0005524
Seca5g03695 1398 Gene3D Transferase(Phosphotransferase) domain 1 1196 1398 - -
Seca5g03695 1398 PANTHER SERINE-THREONINE PROTEIN KINASE 254 1373 - -
Seca5g03695 1398 MobiDBLite consensus disorder prediction 1378 1398 - -
Seca5g03695 1398 CDD STKc_MAP3K-like 1114 1371 - -
Seca5g03695 1398 SUPERFAMILY CAD & PB1 domains 203 293 - -
Seca5g03695 1398 SMART PB1_new 202 291 IPR000270 GO:0005515
Seca5g03695 1398 MobiDBLite consensus disorder prediction 145 184 - -
Seca5g03695 1398 Pfam PB1 domain 207 289 IPR000270 GO:0005515
Seca5g03695 1398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1233 1245 IPR008271 GO:0004672|GO:0006468
Seca5g03695 1398 Gene3D Phosphorylase Kinase; domain 1 1101 1195 - -
Seca5g03695 1398 Gene3D - 208 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03695 Seca-Chr5 93925962 93933821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03695 92 662 MAP Kinase Kinase Kinase AT3G46920 38.554 1.09e-91 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Seca5g03695 PK_Tyr_Ser-Thr 8.4e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03695 - - gmx:100776264 2120.89