Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03666 ATGAATTTTTCGGTTCCCAAATTTAAAACTGAATACCCATACACAATGGGTTTAGGTTCAGTTCTTTGCTTAAACTCGACTCTTATTGGACTCGTTTTCCTAGTCCTTTTTCCAGTACTCTTTCTCATACGAAGGTCCAAAATTGTACGCAGTAGAATGCAGCCACAGCCACCTCTAGCTGCTGGTGCGTGGCCCATAATTGGTCATCTCTGGCAGTTAAGTGGTTCTGAAATGCCTCAATTAACTTTGGGTGCAATGGCTGACAAACATGGACCCATATTCACCATTAGGCTCGGGTCACAACGTGCCGTGGTAATCAGCAACTGGAAAGTGGCTAAAGAATGCTTCACCACCAACGACCTGGCCGTATCTTCGCGTCCTAGGGTCATTGCTGTCCAAAAATTGACCTACGACCAAGCCATATTTGCATTCGCACCCCACGGTCCTTATTGGCGTGAAGTGCGCAAGATTGCCACTGTAGAGTTGCTCTCGAATCGCCGAATCGAGCTATTAAGCCCAGTTCGTGTCTCTGAAGTGGAAACAAGCATTAAAGGGCTTTTCAAAATATGGGCCGAGAAAAAGGACGAATTGGGCCGAGTGCAAGTTGAGATGAGGCAGTGGTTTAGTGAGTTGACACTGAATGCGGTTCTTAGAATGGTGGCTGGGAAGCGATGTTTTGGCGCCACGGGTGAGGAGGTGTCACGAAGGTGCTTGAAAGCGATGAGGGACTTCTTCCGTCTGAACGGGTTGTTCCTTGTGGGTGATGCGGTTCCTTGTCTTCGATGGTTGGATTTGGGTGGGCATGAGAAAGCCATGGAAGAAACTGCAAAGGAATTGGATAGCATTTTAGGTGAGTGGTTAGAGGAGCACCGAAAGAAGAGAGGTTCGGGTGTGGTTGCAGGGGACCATGACTTTATGGATGTTATGCTTTCATGTCTTGATGCAACTGATTTTGCAGGATATGATGAGGATACGATTCACAAAGCCACAACATTGATTTTAATTGCAGGAGGGGTTGACACCACTGCAACAGCCCTTACATGGACAATATGTCGTTTGCTAAATAACCCTGCTACTTTGAAAGAAGCACAAAAGGAATTGGATATCCAAATTGGGAAAGAACAACCTGTGAAGGAGTCAGACATAGACAAGTTGGTCTACATTCAAGCCATAGTTAAAGAGACGTTAAGACTAAACCCTCCAGCACCTTTTTCAGGACCTCGTGAGTTCACAGAGGATTGCACCATAGATGGCTACCACATCACAAAGGGAACACGACTAATCACAAATTTGTGGAAGATTCACACTGATCCTAATGTTTGGTCAGATCCATTAGAGTTCAAGCCAGAGAGATTCCTGACTACCTACAGAGATTTTGATGTTAGAGGTGGTAATCATTTTGAGTTAATGCCATTTGGAAGTGGGAGAAGAATGTGCCCTGGAATATCTTTTGCCCTTCGGATGGTTCATCTAGTTTTGGCTAGTTTCTTGCAATCCTTTGATATTTCAAAACCATCTGATGAACCCATTGATATGTCCCAAAGCTTTGGCCTCGTAAACATGAAAGCCACTCCTCTTGATGTTCTCATCAACCCACGTGTCTCTTCCAGACTTTATGATTCATTGTGA 1629 0.4494 MNFSVPKFKTEYPYTMGLGSVLCLNSTLIGLVFLVLFPVLFLIRRSKIVRSRMQPQPPLAAGAWPIIGHLWQLSGSEMPQLTLGAMADKHGPIFTIRLGSQRAVVISNWKVAKECFTTNDLAVSSRPRVIAVQKLTYDQAIFAFAPHGPYWREVRKIATVELLSNRRIELLSPVRVSEVETSIKGLFKIWAEKKDELGRVQVEMRQWFSELTLNAVLRMVAGKRCFGATGEEVSRRCLKAMRDFFRLNGLFLVGDAVPCLRWLDLGGHEKAMEETAKELDSILGEWLEEHRKKRGSGVVAGDHDFMDVMLSCLDATDFAGYDEDTIHKATTLILIAGGVDTTATALTWTICRLLNNPATLKEAQKELDIQIGKEQPVKESDIDKLVYIQAIVKETLRLNPPAPFSGPREFTEDCTIDGYHITKGTRLITNLWKIHTDPNVWSDPLEFKPERFLTTYRDFDVRGGNHFELMPFGSGRRMCPGISFALRMVHLVLASFLQSFDISKPSDEPIDMSQSFGLVNMKATPLDVLINPRVSSRLYDSL. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03666 542 SUPERFAMILY Cytochrome P450 63 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 430 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 111 132 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 CDD CYP82 91 533 - -
Seca5g03666 542 Pfam Cytochrome P450 61 521 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PANTHER CYTOCHROME P450 82C3-RELATED 32 539 - -
Seca5g03666 542 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS P450 superfamily signature 479 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 Gene3D Cytochrome P450 42 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03666 542 FunFam Cytochrome P450 82C4 47 531 - -
Seca5g03666 542 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03666 Seca-Chr5 93657611 93661020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03666 58 539 Cytochrome P450 AT4G31940 51.521 2.47e-177 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03666 - - qsu:112023929 652.129