Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03657 ATGGAAAGTTCCAAGAGCAACAGAGGGGAGAAAAGAGGGTATGAACTAGTTAAGGAGGGTGATGATGCACAGCATCATCTGACTCAGTCAAAGAAGCCAAAACTACCCGGTTTAGCCAGTGTAATTGTGGAAGCTTTAAAGGTAGATAGTCTGCAGAGACTTTGCTCATCTTTGGAGCCTCTTCTGAGGAAAATTGTCAGTGAAGAAGTGGAGCGTGCTTTGGCAAAAATGGGCCATGCTAAACTGGGTGAAAGATCTCCCCCACCAAGAATTGAAGGACCAGGGGAAAAAAATCTGCAACTTCATTTCAGAACAAAAATGCCACCTCACTTGTTCACAGGGGGGAAGGTTGAGGGAGAGCAAGGAGCAGCTATCCATGTTGTTTTGCTGGATCCAAACACAGGCGATGTTGTTCAAGTTGGACCAGAATCAGTTGCTAAATTGAATGTTGTGGTACTTGAAGGTGACTTTAGTGAGGAAGCTGATGATGATTGGACAAAAGAACACTTTGAAAGCCATGAAGTAAAGGAACGTGAGGGGAAAAGGCCACTTCTAACTGGAGATTTGCAAGTTAGCCTAAAGGAAGGGGTAGGAACCTTAGGTGATCTTACTTTCACTGACAATTCTAGCTGGATAAGAAGCAGAAAATTCAGGCTTGGTGTTAAGGTTGCTCCTGGTTATTGTGAGGGAATTCGTGTGCGCGAAGGAAAGACTGAAGCCTTTGCTGTCAAAGATCATAGAGGAGAATTATACAAGAAACACTATCCACCTGCTTTGCATGATGAAGTATGGAGATTGGATCGGATAGCCAAGGATGGGGCACTTCACAAAAAACTGATTCAAGCAAAAATATTGACTGTAGAAGATTTCCTGCGCCTTCTTGTCCGCGAACCACAGAAATTAAGAAGTATACTTGGCAGTGGAATGTCCAACAGGATGTGGGAGAACACTGTAGAGCATGCCAAGACATGTGTCTTGGGTGGTAAGCTCTTTGTTTACTACACTGATGAATCTCATAACACTGGCATTGTGTTCAACAACATATATGAGCTGAGAGGCCTCATTGCTGATGGACAGTTCTACTCTTTGGAATCACTTACTCCAAATCAGAAGGTCAATTTTCTTCACTAA 1131 0.4332 MESSKSNRGEKRGYELVKEGDDAQHHLTQSKKPKLPGLASVIVEALKVDSLQRLCSSLEPLLRKIVSEEVERALAKMGHAKLGERSPPPRIEGPGEKNLQLHFRTKMPPHLFTGGKVEGEQGAAIHVVLLDPNTGDVVQVGPESVAKLNVVVLEGDFSEEADDDWTKEHFESHEVKEREGKRPLLTGDLQVSLKEGVGTLGDLTFTDNSSWIRSRKFRLGVKVAPGYCEGIRVREGKTEAFAVKDHRGELYKKHYPPALHDEVWRLDRIAKDGALHKKLIQAKILTVEDFLRLLVREPQKLRSILGSGMSNRMWENTVEHAKTCVLGGKLFVYYTDESHNTGIVFNNIYELRGLIADGQFYSLESLTPNQKVNFLH. 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03657 376 PANTHER OS02G0177800 PROTEIN 11 373 IPR012416 GO:0005516
Seca5g03657 376 MobiDBLite consensus disorder prediction 1 29 - -
Seca5g03657 376 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
Seca5g03657 376 Pfam Calmodulin binding protein C-terminal domain 329 372 IPR046829 -
Seca5g03657 376 MobiDBLite consensus disorder prediction 1 32 - -
Seca5g03657 376 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03657 Seca-Chr5 93548217 93553835 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03657 11 373 Calmodulin-binding Proteins AT2G24300 75.549 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03657 - - gmx:100775528 701.049