Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03642 ATGGACTTTGTGGCTACAGTAACAGCAGGAAGGAGTTGCTCTGCTTTTGCAAGGATGGCAGCAATAGTTGTGAAGGGTGTAAGAACACTTGTGCTCTCTGTGGACAGGACCCTTAGACCTGACTTGAAAAGAGGCCTCCTCACAGAAGTAGAAGAACAACTTGTTATCGATCTCCATGCCCGTCTTGGCAACAGGACTTATATTTATGAAGGTGATCAACAAGATATTGAAGTTGTCAAGTATGAGAGTGAGAGTAGCAGTGAAGGTGGAAGTGATGATGAGAGAAATCAGCCTCACTCTTTCACTTCTCAGCAATGGCCTCAAAGTTACAAGTATAATCTTCTTCACCATGTTTAA 357 0.4314 MDFVATVTAGRSCSAFARMAAIVVKGVRTLVLSVDRTLRPDLKRGLLTEVEEQLVIDLHARLGNRTYIYEGDQQDIEVVKYESESSSEGGSDDERNQPHSFTSQQWPQSYKYNLLHHV. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03642 118 MobiDBLite consensus disorder prediction 80 105 - -
Seca5g03642 118 MobiDBLite consensus disorder prediction 80 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03642 Seca-Chr5 93388778 93391360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03642 1 65 MYB Transcription Factor Family AT4G12350 48.485 1.92e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03642 K09422 - ming:122081839 57.7658