Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03603 ATGCCCACTCGCTGTGAAATATGCTGTGAGATCATGATTGCCGTCTTACTCCCTCCATTGGGTGTTTGCTTACGCCATGGTTGCTGCAGTATTGAATTCATCATCTGCTTGCTGCTGACAATACTGGGGTATATTCCAGGAATAATCTATGCTCTCTATGCTATTGTCTTCATTGATCGAGATCAGTATTTTGATGAATACAGGCGTCCCCTCTATTCTGCTTAG 225 0.4356 MPTRCEICCEIMIAVLLPPLGVCLRHGCCSIEFIICLLLTILGYIPGIIYALYAIVFIDRDQYFDEYRRPLYSA. 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03603 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 58 IPR000612 GO:0016020
Seca5g03603 74 Pfam Proteolipid membrane potential modulator 8 56 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03603 Seca-Chr5 93010836 93011988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03603 1 74 RCI2 Gene Family AT4G28088 78.378 8.76e-41 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03603 - - gmx:100306426 152.91