Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03579 ATGGTGAATATGTGGGCCATAACGCATGACGAGAAGGTGTGGGCAGAGCCAGAGGAGTTCAAGCCTGAGAGGTTCATGAAAGAGGATGTGAACATAATGGGATCTGATTTGAGGTTGGCTCCATTTGGGTTTGGAAGAAGGGTCTGTCCTGGGAAGACCATGGGCTTAGCCTCTATTCACCTCTGGCTTGCACAATTGCTTCAAAACTTCAAATAG 216 0.4769 MVNMWAITHDEKVWAEPEEFKPERFMKEDVNIMGSDLRLAPFGFGRRVCPGKTMGLASIHLWLAQLLQNFK. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03579 71 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 42 51 IPR017972 GO:0005506|GO:0016705
Seca5g03579 71 SUPERFAMILY Cytochrome P450 1 71 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03579 71 Pfam Cytochrome P450 1 71 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03579 71 PRINTS E-class P450 group I signature 39 49 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03579 71 PRINTS E-class P450 group I signature 49 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03579 71 PRINTS E-class P450 group I signature 3 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03579 71 PANTHER CYTOCHROME P450 78A7-RELATED 1 71 - -
Seca5g03579 71 Gene3D Cytochrome P450 1 71 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03579 Seca-Chr5 92749002 92749217 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03579 1 71 Cytochrome P450 AT1G13710 73.239 3.36e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03579 K20619 - dct:110114083 137.887