Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03554 ATGAACATGTTAGACCACCTCACACACCAATCTTTAGCCAAGCTAGCAAACCAATACGGCGGCGTTTTGCACTTCCGCATAGGGTTCCTCCACATGGTTGCAATTTCCAATCCAGAAGCAGCACGCCAAGCGCTCCAACAACAGGACATCATCTTCTCCAATCGTCCTGCCACTGTAGCTATCAAGTACCTCACCTATAACCGTTCTGACATGGCATTTGCTCATTATGGCCCTTACTGGCGCCAGATGCGTAAGCTCTGCCTCATGAAGCTTTTCAGCCGTAAGCGTGCAGAGTCATGGCGGTCCGTCAGAGACGAAGTTGACGCCGTCGTCCGTGCCGTCGCGGTGAGTGTCGGCAAGCCTGTCAACATAGGGGAGATGTTGTTTAATCTGACGAAGAACATCGTGTTTCGTGCTGCTTTTGGGTCTAGCTCGAGGGAAGACCAACAAGAGTTCATTGCAATCATGCAGGAGTTTTCTAAGTTGTTCGGAACCTTCACTATCGCTGACTTTATTCCATTTCTGAGGTGGATTGTTCCCACGGGTCTCAACGAAAGGCTCATCAAGGCTCGTGAGGCATTGGACCGTTTCATAGACAAGATCATCGACCAACATATGGAGAAGAAGAGGACCATGGGCAATGGCGGTGAAGAGATTGGTGACATGGTTGATGAGTTGCTTGCTTTTTGCGACGGTGAGGCTGGGCTTAATAGTGAATCAAACAACTCCATCAAACTCACCAAGGATAACATCAAAGCGATCATGATGGATTTGATGTTTGGAGGGACAAAGACGGTGGCATCAGCAATAGAGTGGGCAATGGTGGAGTTGATGAGAAGCCCAGAACACCTAAAGCACGTGCAACAAGAACTGGCCACTGTGGTGGGCCTAGACCGTTGTGTGGAGGAGTCAGACATCAACAAACTTGTCTATTTGAAATGTGTCATCAAGGAGACACTACGTCTCCACCCACCAGTCCCTATGCCTCGCCACGAAACGGCAGAGGACACGGTGGTGGCTGGTTACTTCATCCCAAAGGGCTCATACGTGATGTTTAATGTGTGGGCCATTTGGAGGGACAAGGATTCATGGGAGGACCCAGAAACATTCAAGCCCACACGATTTCTTGACCCAAGATTTCAAAGGGACAGACTTTGA 1158 0.494 MNMLDHLTHQSLAKLANQYGGVLHFRIGFLHMVAISNPEAARQALQQQDIIFSNRPATVAIKYLTYNRSDMAFAHYGPYWRQMRKLCLMKLFSRKRAESWRSVRDEVDAVVRAVAVSVGKPVNIGEMLFNLTKNIVFRAAFGSSSREDQQEFIAIMQEFSKLFGTFTIADFIPFLRWIVPTGLNERLIKAREALDRFIDKIIDQHMEKKRTMGNGGEEIGDMVDELLAFCDGEAGLNSESNNSIKLTKDNIKAIMMDLMFGGTKTVASAIEWAMVELMRSPEHLKHVQQELATVVGLDRCVEESDINKLVYLKCVIKETLRLHPPVPMPRHETAEDTVVAGYFIPKGSYVMFNVWAIWRDKDSWEDPETFKPTRFLDPRFQRDRL. 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03554 385 Pfam Cytochrome P450 7 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 SUPERFAMILY Cytochrome P450 6 380 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 353 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 16 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 313 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 40 61 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 250 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 131 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS E-class P450 group I signature 270 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 Gene3D Cytochrome P450 1 384 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS P450 superfamily signature 314 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PRINTS P450 superfamily signature 261 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03554 385 PANTHER CYTOCHROME P450 84A1-RELATED 1 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03554 Seca-Chr5 92458396 92462990 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03554 1 378 Monolignol Biosynthesis Gene Families AT4G36220 66.406 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03554 K09755 - gmx:100807448 541.191