Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03551 ATGGTTACCATCAAAGCATCTTACAATGTCATTCCTAAAGAGCCAACTCCCATTGTTCGTTTAGAGCTATCCGATAATGACCAAATGTTGCGTCGAAGTCATGTTTCCACCATCTATGTTTACAACACAAATCCCAACCTTGATGCCATTGAGAGAATGAGTGAGTCCCTTAGTAACATTTTAGTCAATTACTATCCAATAGCTGGCCGATTGAGTTGGATAGAAGGTGGTCGATTGGAATTGAATTGTAATGCAAAAGGAGCATTATTATTGGAAGCTGAATCCACAAAAACATTAGATGAATATGGAGATTTTTCACCCAATGACTCCATCAAGGAACTCACTCCTTCAATTGATTATAGTCAACCACTAGAGGAGATTCCTTTATTGGTGGTACAACTCACAAGATTCCATTGTGGCAAAGGTGTTGCAATTGGAGTTGCTATCTCACATCCTTTGGGTGATGGGTTTGCTTCTACTCGCTTCATTAACACATGGGCCAAGGTGTCTCGTGGAGATAAATTAAATGATGAAGAAAAGTTTCCATTTTTGGATCGATCTATAATCAAATCTCCACACCCACCATTGACACCACGATTTGAACACCCTGAATTTAAAGGGTTACCACTCAAGCTAGGTAGCATTGATAGCAAGGAAGAGCAAAAGAAGAAGCTTATTGCAACAACATTGAAACTCACTTCAAACCAAGTGAAGAAATTGAAGAATAAGGCCAATGAAGAAAAAGGGTCACTATCATTATCAAGATCTTATAGTAGATTTGAATCTATTGCGGCACATATATGGAGATGTGCATGTAAGGCTCGTGAACTTGATGAGAATCAACCAACTAGAGCTCGATTCAATGTTGATGTTCGCAATAGATTGAATCCACCTTTACCTCCAAATTATTTTGGGAATGCTGTGGCTCCAACTGTGTCACCATTGTGTTATGTTGGAGAAATCATGTCAAAACCTTTGAGTTTTGCTGCCCAAATGATAAGGGAAGGTTCTGAGCTTATTACAAATGACTACATAAGGTCACAACAAGATTTTGTTAGGGGGCATGAGGAAATGGATGGGATAAGGCCTTCTTTTAAACTTCGTGGGGAAGATAATAAGAATAATGCTCCGTTTTATGGGAATCCTAATATTAACTTTGTGATATTGATGAGGATGCCATGGGGTGAAGTTGATTTTGGATGGGGAAAACCAATGTATTTTGGTCCATCACTTGTGTGTCCAACTGATAAGGCAATTCTTATTGACTCAGATGGGGATGGTTCTGTCATCATCTCTATGCATTTTCAAGAAGTGCATATGGAGCTTTTTACTAAGTTCTTTTGGCAGGATATTTAA 1356 0.3864 MVTIKASYNVIPKEPTPIVRLELSDNDQMLRRSHVSTIYVYNTNPNLDAIERMSESLSNILVNYYPIAGRLSWIEGGRLELNCNAKGALLLEAESTKTLDEYGDFSPNDSIKELTPSIDYSQPLEEIPLLVVQLTRFHCGKGVAIGVAISHPLGDGFASTRFINTWAKVSRGDKLNDEEKFPFLDRSIIKSPHPPLTPRFEHPEFKGLPLKLGSIDSKEEQKKKLIATTLKLTSNQVKKLKNKANEEKGSLSLSRSYSRFESIAAHIWRCACKARELDENQPTRARFNVDVRNRLNPPLPPNYFGNAVAPTVSPLCYVGEIMSKPLSFAAQMIREGSELITNDYIRSQQDFVRGHEEMDGIRPSFKLRGEDNKNNAPFYGNPNINFVILMRMPWGEVDFGWGKPMYFGPSLVCPTDKAILIDSDGDGSVIISMHFQEVHMELFTKFFWQDI. 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03551 451 Gene3D - 213 449 IPR023213 -
Seca5g03551 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Seca5g03551 451 Pfam Transferase family 1 445 - -
Seca5g03551 451 Gene3D - 1 207 IPR023213 -
Seca5g03551 451 Coils Coil 230 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03551 Seca-Chr5 92441834 92443189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03551 2 449 Monolignol Biosynthesis Gene Families AT5G48930 34.146 2.30e-91 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03551 K13065 - gmx:100779814 519.235