Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03529 | ATGGAAAACCCCAGATGCGGGTTTCTCCTTGCTCTGCCATCGTTCCTCTTGTTACTGGCTTCATTCCCTTTCAGTGCAGAATCCAAGTGCACACAGGGTTGTCCACTAGCTCTAGCCTCCTACTACATATGGAAAGGTTCCAACCTCACATATATTTCAGAAATCATGCCATCTTCGCTTCTCACAAAGCCTGAAGACATAGTCAACTACAACAAAGCCACTATACCTAACAAAGACAGTGTTCAATCAGACCAAAGGGCCAACATTCCATTCCCATGTGACTGCATCAATGGCGAGTTCCTCGCTCACACGTTTAGTTACGATGTTCAGACAGGGGACACGTATGAAAAAGTTGCTGGGTACTACGCTAACCTCACCAATGTTCAATGGTTGATGAGGTTCAATAGCTACGGTCCCAATAGCATTCCAGACACTGGATCCCTTAATGTTACCGTTAACTGTTCTTGTGGGAACAGTGATGTTGATGATTATGGATTGTTCATCACTTACCCTCTTAGGCCTGGGGAGACTTTGGGGACTGTGGCAAATGAAATGAACCTTGATTCAGCCTTGCTGCAGAGGTACAATCCCGGTGTCAATTTCAACCAAGGGAGTGGCCTGGTTTTTATTCCGGGCAAAGATCAAAATGGTAGCTATGTGCTTTTGGTGTCCAGTTCAGGAGGTCTTGCTGGTGGAGCTATTGCTGGAATAGCTATTGGAGTAGTGGCTTGTCTTCTGTTATTGGCAGTTTGTATCTATTTTGGATATTTCCGGAAGAAGAAGATACAGAAGGAGGAATTCCTTGCACAAGATTCCAATGCTTTTTTAGCTCAAGATGGGAAGGATGAAACTTCTCGTAGTGCTGCAAATGAAACGCCGAGGCCTGGTGGTCCTGCTGTCATCACAGGCATAACAGTGGACAAATCGGTGGAATTCTCATATGAAGAGCTAGCAACTGCCACAGATAACTTTAGTATGGCTAATAAAATTGGTCAAGGTGGTTTTGGCTCTGTCTACTATGCGGAGTTGAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCAAAAGAATTTCTTGCTGAATTGAAAGTCCTGACACGTGTTCATCATCTTAACTTGGTGCGGTTGATTGGATATAGTATCGAGGGCTCTCTTTTCCTTGTCTATGAATACATTGAGAATGGAAACTTAAGCCAACATTTGCGTGGTTCAGGTAGAGATCCACTGTCATGGGCTGCAAGGGTGCAGATTGCTTTGGATTCCGCCAGAGGTCTTGAATATATTCATGAGCATACAGTGCCTGTATATATTCATCGTGACATAAAGTCAGCAAACATATTAATAGACAAAAACTTCCGGGGGAAGGTTGCTGATTTTGGATTGACCAAACTGACAGAAGTTGGAAGCTCATCGCTTCCCACTGGTCGTCTTGTCGGAACATTTGGATACATGCCACCAGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTGTATGCTTTTGGAGTTGTTCTTTATGAACTTATTTCAGCTAAGGAAGCAATCGTCAAGACAAGCGAATCTATTGCTGACTCAAAGGGCCTCGTAGCTTTGTTTGAAGAAGTTCTTAGTCAGCCTGATCCTACAGAAGATCTTTGCAAACTAGTGGATCCAAGGCTTGGGGATAACTACCCTATTGATTCAGTTCGCAAGATGGCTCAACTAGCCAAAGCATGTACACAGGACAATCCCCAACTGCGTCCAAGTATGAGATCCATTGTTGTTGCTCTTATGACACTTTCTTCAACTACAGATGATTGGGATGTTGGCTCCTTCTATGAAAATCAAAATCTTGTGAATCTTATGTCAGGAAGATAG | 1872 | 0.4359 | MENPRCGFLLALPSFLLLLASFPFSAESKCTQGCPLALASYYIWKGSNLTYISEIMPSSLLTKPEDIVNYNKATIPNKDSVQSDQRANIPFPCDCINGEFLAHTFSYDVQTGDTYEKVAGYYANLTNVQWLMRFNSYGPNSIPDTGSLNVTVNCSCGNSDVDDYGLFITYPLRPGETLGTVANEMNLDSALLQRYNPGVNFNQGSGLVFIPGKDQNGSYVLLVSSSGGLAGGAIAGIAIGVVACLLLLAVCIYFGYFRKKKIQKEEFLAQDSNAFLAQDGKDETSRSAANETPRPGGPAVITGITVDKSVEFSYEELATATDNFSMANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEYIENGNLSQHLRGSGRDPLSWAARVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTSESIADSKGLVALFEEVLSQPDPTEDLCKLVDPRLGDNYPIDSVRKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSTTDDWDVGSFYENQNLVNLMSGR. | 624 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03529 | 623 | SMART | serkin_6 | 324 | 597 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03529 | 623 | CDD | STKc_IRAK | 330 | 592 | - | - | |
Seca5g03529 | 623 | Pfam | Protein tyrosine and serine/threonine kinase | 326 | 594 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g03529 | 623 | Gene3D | Transferase(Phosphotransferase) domain 1 | 395 | 614 | - | - | |
Seca5g03529 | 623 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 439 | 451 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g03529 | 623 | FunFam | LysM receptor kinase 2 | 303 | 394 | - | - | |
Seca5g03529 | 623 | ProSiteProfiles | Protein kinase domain profile. | 324 | 598 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03529 | 623 | SUPERFAMILY | Protein kinase-like (PK-like) | 305 | 595 | IPR011009 | - | |
Seca5g03529 | 623 | FunFam | PTI1-like tyrosine-protein kinase 3 | 395 | 609 | - | - | |
Seca5g03529 | 623 | Gene3D | Phosphorylase Kinase; domain 1 | 301 | 394 | - | - | |
Seca5g03529 | 623 | ProSitePatterns | Protein kinases ATP-binding region signature. | 330 | 352 | IPR017441 | GO:0005524 | |
Seca5g03529 | 623 | PANTHER | CHITIN ELICITOR RECEPTOR KINASE 1-RELATED | 16 | 609 | IPR044812 | GO:0019199|GO:0045087 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03529 | Seca-Chr5 | 92210314 | 92217831 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03529 | 10 | 623 | Receptor kinase-like Gene Family | AT3G21630 | 58.880 | 0.0 | 715 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LysM | Seca5g03529 | PK_Tyr_Ser-Thr | 1.7e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03529 | - | K13429 | gmx:100777781 | 998.423 |