Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03526 | ATGTCTTCCTCATTCTGTTTGAAGCTTTTCTCAATCCTTTTGTTCTGCATACATATCTTCCCTATATTTTCACATACTGAAACAACATCAGTTTTCAGCCACTACAACTGCACAAGCACACATACATTTAGTCCCAACAGCACTTACCAATCCAACCTAAACACACTCTTATCTACACTTTCATCCAAAGCTTCTAGCAGCACTAACCAAGTCTTCTACAACACCACAATTGGTGGAACAAACACTTGGGACACTATCTATGGCCTCTTCATGTGCATTGGATACATAGAGAACTGTGAAGAATGTGTGAAGAACTCCATTCAGACACTTACCTCAATGTGTGCCTTCAATAAAGAAGCTATAATTTGGTCAGATGAATGCTTGGTGCATTATTCCAACCAATCTTTCTTCAACACTATGGAGGAATGGCCATTATATTGTGTGCAAAACACAGAGGATTATCATGGCCTATTGGATAGCTTCAACAAAGTGATAAGTTCCTTGATGGAGGATCTTCTAACTCAAGCTAGTGAAGCTCCAATTGGTTCTAATAAATTTTCTGTCAAGAAAGCAATTTTCTCTGAGGACAATTTTTTGTTTGGCCTTGCTCAATGCACCCCAAATCTCTCAAAGGACAATTGCACAGAGTGTCTCAAGGATGCCATGGCTTATCTACAAAACTCATGTGCTAGAGGAAAGACAAGAGGAAGAGTTCTATATCCAAGTTGTATTGTTAGATATGATCCTTATCCATTTTCTCCATTACATAGAGGAGAGAAAAAGAATCATGGAGCACTAGCATCTTTCTTGATTCTCCATGCACTTATTCCAGTTATTGTTTTCTCTTTTGGGTGTTATCTGCTACATAGGATAGCAAGGAGGAATCACAAGCACCAGAAAGAAAATTTTGGGGAAGAGATTACAACAGAAATGAACTCTTTACAATTTGATTTGAGTACTATTCAATTAGCAACAAACAAGTTCTCTGTTGATAACAAGATAGGGGAAGGTGGTTTTGGAGCAGTTTACAAGGGTGTGTTTCCTAATGGACATGAAATAGCTGTAAAGAGGCTCACAAGAAATTCAAGTCAAGGAGCTGTAGAATTCAAGAATGAAGTTTTGTTGATAGCCAAGCTTCAACACAGAAATCTTGTGAGATTGTTAGGATTTTGCATGGAAAGGAATGAGAAGATACTCATTTATGAATTTATGCACAACAAAAGCCTTGATTACTACCTATTCAGTATGGTACTCTTAACCTTTTATCCTTATTCACTTAATGCTTTTTTATTTTATACAACTTGTGACAATTTAAACATCACAGGCCCTGTAAACCATAGAAAATTAACTTGGCATGAACGTTACAAGATCATAATAGGGATTTCCCGAGGTATTCTTTATCTCCATGAGGATTCTCATCTCAAAATCATACATTGTGATCTTAAACCCAGCAACATTTTGTTAGATGACAAAATGAATGCAAAGATATCAGATTTTGGCTTGGCAAGGATTGTTTCCATGGATCAAATGCAAGGAAATACTAGTATAATTGCTGGGACATATGGCTACATGTCTCCTGAATATGCAATGCTAGGCCAATTTTCTGTGAAATCTGATGTATTCAGCTTTGGAGTCATAATTCTTGAGATTGTTAGTGGAAAAAGAAATGTTGATTTTAATGGGGAAGATTCAATTGATGACCTCTTGAGCCATGCATGGAAGAAGTGGAGGAATAATAAGGAATTAGAATTGTTGGATCCTACATTAGCACACTCATTTTCAGAAAAAGAAATTAAGAGATGCATACAAATTGGTCTACTATGTGTGCAGGAAAACCCAGATCAAAGGCCTACTATGGCAACAATTGCTTTGTATTTTAACTGTGATTCAATGGTTCTGCCATTACCTAAAGAGCCAGCATTTTTCATGCGTGGAAGAACAGAATCAAGGATGGCTAAAAAGGAATCAGAGTTAGGTCGACCTAAAAGTCATTAA | 1995 | 0.3684 | MSSSFCLKLFSILLFCIHIFPIFSHTETTSVFSHYNCTSTHTFSPNSTYQSNLNTLLSTLSSKASSSTNQVFYNTTIGGTNTWDTIYGLFMCIGYIENCEECVKNSIQTLTSMCAFNKEAIIWSDECLVHYSNQSFFNTMEEWPLYCVQNTEDYHGLLDSFNKVISSLMEDLLTQASEAPIGSNKFSVKKAIFSEDNFLFGLAQCTPNLSKDNCTECLKDAMAYLQNSCARGKTRGRVLYPSCIVRYDPYPFSPLHRGEKKNHGALASFLILHALIPVIVFSFGCYLLHRIARRNHKHQKENFGEEITTEMNSLQFDLSTIQLATNKFSVDNKIGEGGFGAVYKGVFPNGHEIAVKRLTRNSSQGAVEFKNEVLLIAKLQHRNLVRLLGFCMERNEKILIYEFMHNKSLDYYLFSMVLLTFYPYSLNAFLFYTTCDNLNITGPVNHRKLTWHERYKIIIGISRGILYLHEDSHLKIIHCDLKPSNILLDDKMNAKISDFGLARIVSMDQMQGNTSIIAGTYGYMSPEYAMLGQFSVKSDVFSFGVIILEIVSGKRNVDFNGEDSIDDLLSHAWKKWRNNKELELLDPTLAHSFSEKEIKRCIQIGLLCVQENPDQRPTMATIALYFNCDSMVLPLPKEPAFFMRGRTESRMAKKESELGRPKSH. | 665 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03526 | 664 | Pfam | Salt stress response/antifungal | 37 | 134 | IPR002902 | - | |
Seca5g03526 | 664 | Pfam | Salt stress response/antifungal | 152 | 248 | IPR002902 | - | |
Seca5g03526 | 664 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 289 | 403 | - | - | |
Seca5g03526 | 664 | Gene3D | Transferase(Phosphotransferase) domain 1 | 437 | 630 | - | - | |
Seca5g03526 | 664 | CDD | STKc_IRAK | 334 | 623 | - | - | |
Seca5g03526 | 664 | ProSiteProfiles | Protein kinase domain profile. | 328 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03526 | 664 | ProSitePatterns | Protein kinases ATP-binding region signature. | 334 | 356 | IPR017441 | GO:0005524 | |
Seca5g03526 | 664 | Gene3D | - | 29 | 136 | IPR038408 | - | |
Seca5g03526 | 664 | Gene3D | - | 145 | 252 | IPR038408 | - | |
Seca5g03526 | 664 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 33 | 651 | - | - | |
Seca5g03526 | 664 | Pfam | Protein tyrosine and serine/threonine kinase | 330 | 623 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g03526 | 664 | ProSiteProfiles | Gnk2-homologous domain profile. | 142 | 252 | IPR002902 | - | |
Seca5g03526 | 664 | SMART | serkin_6 | 328 | 626 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03526 | 664 | ProSiteProfiles | Gnk2-homologous domain profile. | 31 | 136 | IPR002902 | - | |
Seca5g03526 | 664 | Gene3D | Phosphorylase Kinase; domain 1 | 289 | 403 | - | - | |
Seca5g03526 | 664 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 476 | 488 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g03526 | 664 | FunFam | cysteine-rich receptor-like protein kinase 10 | 424 | 633 | - | - | |
Seca5g03526 | 664 | SUPERFAMILY | Protein kinase-like (PK-like) | 313 | 644 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03526 | Seca-Chr5 | 92185534 | 92188880 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03526 | 4 | 650 | Receptor kinase-like Gene Family | AT4G05200 | 42.012 | 2.32e-178 | 522 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca5g03526 | PK_Tyr_Ser-Thr | 5.7e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03526 | - | - | mtr:11443024 | 862.448 |