Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03525 ATGAATTGCTTAGGAAAAGTGTCACTGAGTTGGTTTGGAAGGGTACCTAGGCTGATAGTAGCAGATGCACAACTAATAAGGATGATATTAACAGATCAGAATGGTCATTATATAAAGCCACCAGTACTTAACCCTTTAATTGATCTTCTGCAATTGGGTGTCTCAACCTTGGAGGGTGAAGCCTGGGCTAAAAGGAGAAAACTAATAACACCTGCTTTCCACTTTGAGAAGTTAAAGGCAATGGTGCCAGCATTCTTAACCAGTTGTTGCAACCTGATCAATCGGTGGGAGAAACTAGTTGAACCCCAAGGATCCTGTGAAGTAGATGTTGCTCCAGAGTTTAACATTTTAGCTGGAGATGTTATTGCTAGAACTGCATTTGGGAGTAGTTATGAAGAGGGAAAGATGATATTTGAATTGCAGACAGAGCAAGTTCAGCTTGTGCTTGAAGCCTATCTCAGCATCTATTTTCCGGGTTTAAGATTCATACCCACTAAGAAAAACAGGAGGAGGTACCAAATATACAACCTAGTCAAAGCAACATTGAAGGATATGATCCAAAAGAAAGAGAATGAAATGATGAAAGGTGAATTGAAAGGGGATGATTTATTGAGCATTCTTTTGCAGTTCAAAGGACAGAGTGATAATTCTCTCACTAGTGAGCATATGATAGAGGAATGCAAGTTGTTCTTCTTTGCTGGTCAAGAGACCACAGCCATTCTACTTACATGGACTATGGTTGTTTTATCAATGCATCAAAATTGGCAAGAAAAGGCAAGAGCAGAGGTATTAGATATTTGTGGCAAAGGGGCACCTGATTTTGAAGCCATAAATCGCCTCAAGATTGTATCAATGGTACTACATGAAGTCCTAAGGTTGTATCCTCCAGTGCCAAAAACAATGAGATACACTAAATGTGAAACCAAAGTAGGAAACATATCTGTACCAGCAGGGGTTGAGGTTTATTTACCATTGATACTTGTTCACTATGATGATAAGTATTGGGACAATCCAGAGGAGTTCAACCCTGAGAGATTTGCTAAAGGGGTTTCAAAAGCTTGTAAAGATCAAATTGCTTTCTATCCATTTGGTTGGGGCCCAAGAATCTGCCTAGGTCAAAACTTTGCCTTGATAGAAGCAAAGATGGCTCTAGCTTTGATTCTTCAACATTTCTCATTCCAGCTCTCTCCCTCTTACACTCATGCTCCATATGATCACATTACTCTTAAGCCACAATATGGAGCTTCTATTATTCTTCAGCGTATCAATTAG 1272 0.3954 MNCLGKVSLSWFGRVPRLIVADAQLIRMILTDQNGHYIKPPVLNPLIDLLQLGVSTLEGEAWAKRRKLITPAFHFEKLKAMVPAFLTSCCNLINRWEKLVEPQGSCEVDVAPEFNILAGDVIARTAFGSSYEEGKMIFELQTEQVQLVLEAYLSIYFPGLRFIPTKKNRRRYQIYNLVKATLKDMIQKKENEMMKGELKGDDLLSILLQFKGQSDNSLTSEHMIEECKLFFFAGQETTAILLTWTMVVLSMHQNWQEKARAEVLDICGKGAPDFEAINRLKIVSMVLHEVLRLYPPVPKTMRYTKCETKVGNISVPAGVEVYLPLILVHYDDKYWDNPEEFNPERFAKGVSKACKDQIAFYPFGWGPRICLGQNFALIEAKMALALILQHFSFQLSPSYTHAPYDHITLKPQYGASIILQRIN. 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03525 423 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 415 - -
Seca5g03525 423 Pfam Cytochrome P450 3 405 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Seca5g03525 423 SUPERFAMILY Cytochrome P450 4 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 Gene3D Cytochrome P450 2 423 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS P450 superfamily signature 285 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 Coils Coil 179 199 - -
Seca5g03525 423 PRINTS E-class P450 group I signature 324 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS E-class P450 group I signature 117 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS E-class P450 group I signature 284 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03525 423 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03525 Seca-Chr5 92171165 92173629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03525 5 420 Cytochrome P450 AT3G14620 52.857 5.82e-155 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03525 - - tcc:18603166 607.06