Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03518 | ATGGCTATGGAGAAAAAGACCAGTGCTGTTGCTTCTTCCTCCGCCTCCTCTTCTTCTGTGACGTCTCCGAAAAAATATGACGTTTTTCTTAGCTTTCGCGGTGAGGATACCCGCAGAAAGTTCACAAGTCATCTTTATGATGCTTTGTGCCGAAAGAAAGTTAGAACCTATATGGACAATGTGCTTGGAAAGGGATATGAGATCTCTCCAGCACTCATCAGAGCCATCGAAGAGTCGCATGCATCTATAGTTATCTTCTCAGAAAACTATGCCTCCTCAACATGGTGTTTGGATGAACTCGTCAAGATTCAGGAATGCAGGCAAGTGCAGGGACAAATTGTGATACCTGTTTTCTACGAAATAGATCCATCAGATGTAAGGAAGCAGAGTGGGAGTTACAAGGAAGCCTTTGCAGCATATGAGGAACGAGGCAACATAGACAAGTTGAAGAAATGGAGAAAAGCTCTCACAGAGGCGGCCAGTTTAGCTGGGTTCGACTCTCGATCATATGGACTTGTAACACCTTCATTCCTTTCTTTTCTGCCCTTTTCATGTGCTAGTGATGACTGTGAACTCATTAAAAGCATTGTCAGAGTTGTTTTGCAAAAATTGAATTCTAGATACCCTCAACAATTGACAGGACCCGTTGGAACTGGAATAAGTTATGGGGAAATTGAATCATCACTGAAAATTGGATCAAGAGAAGTTAGAATCATTGGAATATGGGGCATGGGTGGTATAGGTAAGACCACCCTTGCTACTGCTCTATATACCAAATTGTCTTCTCAATTTGAAGGCCATTGCTTCCTTTCAAATGTAAGGGAAGAATCAAACAAATATGGTCTCCATGTTTTACGTAAAAATCTTTTCTCTAAGCTGTTAGAGGAAGAAAATCTTCATCTTGATGTAACCAATCCAAAGTCCCATTTTGTGGCATGTTTGCTTAAACGTAAAAAAGTTTTTATTGTGTTGGATGATGTGACTAGCTCAGAACAATTACATGATCTAATTAGTAATTACAATTGTTGTGATTACGATTGCTTGGGACCAGGAAGTAGAGTGATTGTAACGACTAGAGATAAGAGCATATTTAGGAAAGTTCATGGAATATATGAAGTCAAGGGATTGAGTGAACATGACTCTCTTCATCTTTTCTGTTTGAATGCCTTTGGAGAAAAGCATCCTAAAAATGGATATGAAGATCTATCACATAGTGCAATTGCCTATTGTAAAGGCAATCCTTTGGCTTTAAAAGTTTTGGGTGCAATTCTTGGTTCAAAAAGAACAATAAGGGCATGGGAACATGGATTGAGAAAGCTCAGAGAGATTCAAGATGTGAAAATTCATGATGTGTTGAGATTGAGTTATGATGACTTAGATCGTATTGAGAAAAACATATTTCTGGACATTGCATGCTTCTCCAAAGGAAAGTCTATAGATCATGTAAAAAGCCTATTGGAAGCTTGCGATTTCTTTCCAGAAAGTGGAATAGAAGACCTTTGTAATAAAGCTCTCATAACTATTTCAGATGATAAAATAGGAATGCATGACCTGATTCAGGAAATGGGTCTGGAGATTGTTAATCGAGAATGTATCAATGACCCTGGAAGACGAAGTCGACTGTGGAAACCTAAGGACGTGTTTGATGTATTGAAAAATGACACGGGAACTAGAGCCGTTGAAGGCATAACTTTTGATATTTCTAAAGCTAGTGATCTGCATTTGAGCTCTTATTCCCTTGAAAGGATGACTTGCTTAAGATATCTTGAAGTCTATGGGATCTCTGACAAATGTAATATTTACTTTCCTGATGGCCTTGGGTCCTTGTCTGATAAATTAAGGTACCTTCATTGGCCTGGATTTTGTCTTGAGTCTTTGCCATCAACCTTTTGTGCAGAAAAGCTTGTAGAGATTCACATGCCTTCTAGCAAACTTAAAATGCTTTGGAATGGAGTTCAGAATCTGGTGAATTTGAAGAAAATTAACCTTGGCTTCTCCAAACACCTGATTGAGGTTCCAGACTTATCTAGGGCCACAAATCTTGAAACTGTAGATCTTCGTTCTTGTGAAAGCTTGAACCAACTCTGTCCATCAGTTTTATCTCTTCCTAAGCTTACACATCTGAATTTACAAAGATGCAGAGAGATTAAAAGCTTTAAATCCAATGTCCATTCAAAATCTGTGTGTGAACTCCAACTTGATGGTTGTTCATCTCTAGTTGAATTTTCAGTGACATCAGAGGAAATGAGGAAGTTGTCCTTACAAGGAACTGCTATATGCGAATTGCCGTCATCAATTTGGCTTAATAGGAAGCTTGCTTATCTTTACCTAAGTCACTGTAACAATCTTAACATTGTTGGAAATAGGTCATCAGATGATCCAGGAATAGAATATCTCAGAGAACTGGACCTTTCTGGGTGCACACAAATCAATGCATTGAATCTCCATCTCATCTTTGATGGCATACGATGTTTAAAACGGCTAGATTTGTCATGCTGCTACCACTTAAAAAAAATCCCTGACAGCATAACAGACCATCAAATACTGAGACAACTTGTGTTAGATGATTGCAGGGATCTTGTGTATCTACCAGAGCTTCCACCATACCTGCAACATTTGAGCGCCTTTAATTGCATTTCTCTAGAGAAAGACTTCACTCAATATCCCGTGCCTGAGCACGTGTTACAAAGCGTGCTTAACTGTCGTGAAAAACCTGAGGTTAGCAATGAGTTTGTTTTCTTCTTCCCAGGAGCCCGAGTTCCAGACGGGTTTCGTTTCATTACAGGAGAGGCTTCAATAACTCCTGCAAATATTCGAAAATCTGACTTGTGCGGTTTCATTTTTTGCATCATTCTTAAGGAGAGCTTAAATGTTGATACCCTTCACCTTGTTCAACTTATCTATGAAAATGAAAAAGAGGTCGGCTATGATGACAGTCAGTATATTGGTAAGGGGCTTTTGTTGGCAGACCATGTGTTATGTTGGTATGGTTCCATCGACAAACTTGTTAATATTCAAGAAAGTGAAGATGATGATCAATTTTACAACATATCATTTGAATTCAAACTTGATGACAAAGATGCACCATGGTCAATGGAGGGGATAAAGGGATGTGGGGTCTACCCAGTATATGCCTGGCAAGTGGGGTGGGAGCTTTCTGATAGATATAGAGAGGAGAAGATACATGGATCAAAATCCAATGCTCAAATCTCTGATACGCATTTGAAAATGGACATTGATGAGTTACAGCCCATAGTAATTGAATGCTCTAATAATGACAATGAAGATGACCAGGAACAAATTCTTACAACTTCTTCCAGCAAAGAAGGGGAGGACTTGAGTGAAAAACCTTCTTGTGACTGCTTCATCGGTCCCTTGCTGAAGCGCTTATGGACAATACTGGTGGGCAGTTGA | 3414 | 0.3928 | MAMEKKTSAVASSSASSSSVTSPKKYDVFLSFRGEDTRRKFTSHLYDALCRKKVRTYMDNVLGKGYEISPALIRAIEESHASIVIFSENYASSTWCLDELVKIQECRQVQGQIVIPVFYEIDPSDVRKQSGSYKEAFAAYEERGNIDKLKKWRKALTEAASLAGFDSRSYGLVTPSFLSFLPFSCASDDCELIKSIVRVVLQKLNSRYPQQLTGPVGTGISYGEIESSLKIGSREVRIIGIWGMGGIGKTTLATALYTKLSSQFEGHCFLSNVREESNKYGLHVLRKNLFSKLLEEENLHLDVTNPKSHFVACLLKRKKVFIVLDDVTSSEQLHDLISNYNCCDYDCLGPGSRVIVTTRDKSIFRKVHGIYEVKGLSEHDSLHLFCLNAFGEKHPKNGYEDLSHSAIAYCKGNPLALKVLGAILGSKRTIRAWEHGLRKLREIQDVKIHDVLRLSYDDLDRIEKNIFLDIACFSKGKSIDHVKSLLEACDFFPESGIEDLCNKALITISDDKIGMHDLIQEMGLEIVNRECINDPGRRSRLWKPKDVFDVLKNDTGTRAVEGITFDISKASDLHLSSYSLERMTCLRYLEVYGISDKCNIYFPDGLGSLSDKLRYLHWPGFCLESLPSTFCAEKLVEIHMPSSKLKMLWNGVQNLVNLKKINLGFSKHLIEVPDLSRATNLETVDLRSCESLNQLCPSVLSLPKLTHLNLQRCREIKSFKSNVHSKSVCELQLDGCSSLVEFSVTSEEMRKLSLQGTAICELPSSIWLNRKLAYLYLSHCNNLNIVGNRSSDDPGIEYLRELDLSGCTQINALNLHLIFDGIRCLKRLDLSCCYHLKKIPDSITDHQILRQLVLDDCRDLVYLPELPPYLQHLSAFNCISLEKDFTQYPVPEHVLQSVLNCREKPEVSNEFVFFFPGARVPDGFRFITGEASITPANIRKSDLCGFIFCIILKESLNVDTLHLVQLIYENEKEVGYDDSQYIGKGLLLADHVLCWYGSIDKLVNIQESEDDDQFYNISFEFKLDDKDAPWSMEGIKGCGVYPVYAWQVGWELSDRYREEKIHGSKSNAQISDTHLKMDIDELQPIVIECSNNDNEDDQEQILTTSSSKEGEDLSEKPSCDCFIGPLLKRLWTILVGS. | 1138 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03518 | 1137 | PRINTS | Disease resistance protein signature | 676 | 692 | - | - | |
Seca5g03518 | 1137 | PRINTS | Disease resistance protein signature | 238 | 253 | - | - | |
Seca5g03518 | 1137 | PRINTS | Disease resistance protein signature | 314 | 328 | - | - | |
Seca5g03518 | 1137 | PRINTS | Disease resistance protein signature | 410 | 424 | - | - | |
Seca5g03518 | 1137 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 22 | 172 | - | - | |
Seca5g03518 | 1137 | SUPERFAMILY | L domain-like | 515 | 882 | - | - | |
Seca5g03518 | 1137 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 205 | 470 | IPR027417 | - | |
Seca5g03518 | 1137 | ProSiteProfiles | TIR domain profile. | 24 | 204 | IPR000157 | GO:0007165 | |
Seca5g03518 | 1137 | Gene3D | Ribonuclease Inhibitor | 727 | 887 | IPR032675 | - | |
Seca5g03518 | 1137 | Gene3D | - | 208 | 372 | IPR027417 | - | |
Seca5g03518 | 1137 | Gene3D | Ribonuclease Inhibitor | 563 | 726 | IPR032675 | - | |
Seca5g03518 | 1137 | Pfam | NB-ARC domain | 232 | 459 | IPR002182 | GO:0043531 | |
Seca5g03518 | 1137 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Seca5g03518 | 1137 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 26 | 784 | IPR044974 | GO:0006952 | |
Seca5g03518 | 1137 | MobiDBLite | consensus disorder prediction | 7 | 21 | - | - | |
Seca5g03518 | 1137 | Pfam | Leucine Rich Repeat | 634 | 653 | IPR011713 | - | |
Seca5g03518 | 1137 | Gene3D | - | 375 | 460 | IPR042197 | - | |
Seca5g03518 | 1137 | Pfam | TIR domain | 25 | 210 | IPR000157 | GO:0007165 | |
Seca5g03518 | 1137 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 15 | 165 | IPR035897 | - | |
Seca5g03518 | 1137 | ProSiteProfiles | Cro/C1-type HTH domain profile. | 420 | 459 | IPR001387 | - | |
Seca5g03518 | 1137 | Gene3D | - | 23 | 207 | IPR035897 | - | |
Seca5g03518 | 1137 | SMART | till_3 | 25 | 162 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03518 | Seca-Chr5 | 92091437 | 92096080 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03518 | 21 | 858 | WRKY Transcription Factor Family | AT4G12020 | 33.333 | 2.01e-105 | 363 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03518 | - | - | cam:101499873 | 1090.87 |