Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03505 ATGGATTTCTCAAAGAGCCTTCTTCAACCCAGGTCATCATCTTCTTCCATTCCTCCACACCGCACCCAACTCCACCCTCGCATGATCTCTCTCTACTCCCCAAATCCAAATCCCAATCCCAATCCCAAACCCCACTCCAAATCCTTCCTCTTCCTCTTCCTCTCCCTTCTCCTCCTCACCTCCCCTTTCCTCTTCTACCTCTTCTCCACCGCATTCCAAATCCACTCCTCCCCAAACTTCTCTTCCCCCAACCCCTCCTTCTTCGCCCTCCTCCTCCACGCTTCCCCTTCCTCTTCCCGCATCTCCATCTTCCACTTCCTCGGCCGCGGCCCCCTCCCCTTCCTCGCCGAGACCGCTTCCGCCGAGTCTAAACCCGGTTTCGCGGTCTTCGGGTCCGACCCGGATGCGGTTCGGGACTCCATTGTGGAACTGGTGGAGTTTGCGAAAGGGAGGGTGCCCAGGAAGGAGTGGGGGAACACGAGGATGCAGCTTATGGCCGCTGAGGAGTTAGAGGGTTTGGGTGCCGAGACAAGGGAGAAGGTGTTGGAGTGTTGCAGACAGGTTCTGAGGTTGTCTGGGTTCCTGTTCAAAGATGAATGGGCACGCGTTATTCCAGGTGAAGAACAAGGCATCTCTTCTTGGGTTGCTGTAAATTATGCTCTTGGAAACTTGGGACGTGAGCCTCAAGAAACAACTGGAATAGTTGAACTTGGTGGGGCTTCTTTGCAGGTTGCATCAGCTTTGCTTAATGCAAAGTTAGTTCAGTCTTCGCGGACTATAAGATTGTCTGGTGTTACTTACAATCTTTACACTAGGAGTTGGCCACACTTCGGTCAGGATATGGCATGGAAATCATTAGAGGAACAGCTGAAACTTAGAGAGTTGAAGCTTTCTTCAAAAGTTAGCGCACTTAATCCTTGCATTCCTAGAGGGTATGAGTATCCTCGGATCTCTAATGCAAGTTATGTAAAACACCCAATCCTCCAACCAGCTGGAAATTTCTCGACATGCAGATCTGAAGCTCTGTCATTGTTAAAAAGAACAGAAGATAGATGCTTGCATCCACCTTGTAAAATCACTTCATCCTTTTACGAGTTATCAGCTGGACAAATTTCTTCAAGAAACTTCTTGTATACTTCTGAGATTCTTGGGATGGATCCTGGGACATCTTTGTTTGAACTAGAGGCAACAGGCCGGCATTACTGTGAAGATCATTGGGATGCTCTTAAAGATCAACATAATGAAATTGATTATCTGGATTTATTGAAATATTGTTTCTCTTCTGCATATATGGTGGCATTATTACATGATGTTCTTGGGATCCCTATGGAAGAGAAAAGGGTTGGATTTGGGAACCAGAAGATGAACATTAGTCATGTTGACTGGACACTTGGATCTTTCTTAATTGAAACAATGGCAGAACCCCTTGAATTGGTGGAGCATATAGATGCAGGAATGATTGTTGGGAATGAATCAGTCACATATTTTTCATTATTTGCATTTCTTTTTTTAATTGGACTTGCTGCATTCTTTGCACTGCAATGTAGAAAGCCTCCATTGAAGACTGTATATGACCTTGAGAAAGGACACTATATTGTTACTCGTGTTCCTAGGTGA 1617 0.4607 MDFSKSLLQPRSSSSSIPPHRTQLHPRMISLYSPNPNPNPNPKPHSKSFLFLFLSLLLLTSPFLFYLFSTAFQIHSSPNFSSPNPSFFALLLHASPSSSRISIFHFLGRGPLPFLAETASAESKPGFAVFGSDPDAVRDSIVELVEFAKGRVPRKEWGNTRMQLMAAEELEGLGAETREKVLECCRQVLRLSGFLFKDEWARVIPGEEQGISSWVAVNYALGNLGREPQETTGIVELGGASLQVASALLNAKLVQSSRTIRLSGVTYNLYTRSWPHFGQDMAWKSLEEQLKLRELKLSSKVSALNPCIPRGYEYPRISNASYVKHPILQPAGNFSTCRSEALSLLKRTEDRCLHPPCKITSSFYELSAGQISSRNFLYTSEILGMDPGTSLFELEATGRHYCEDHWDALKDQHNEIDYLDLLKYCFSSAYMVALLHDVLGIPMEEKRVGFGNQKMNISHVDWTLGSFLIETMAEPLELVEHIDAGMIVGNESVTYFSLFAFLFLIGLAAFFALQCRKPPLKTVYDLEKGHYIVTRVPR. 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03505 538 MobiDBLite consensus disorder prediction 1 21 - -
Seca5g03505 538 Gene3D Exopolyphosphatase. Domain 2 205 458 - -
Seca5g03505 538 MobiDBLite consensus disorder prediction 1 22 - -
Seca5g03505 538 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 54 474 IPR000407 GO:0016787
Seca5g03505 538 Gene3D - 89 465 - -
Seca5g03505 538 Pfam GDA1/CD39 (nucleoside phosphatase) family 87 473 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03505 Seca-Chr5 91976424 91986528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03505 81 475 Calmodulin-binding Proteins AT3G04080 26.179 7.13e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03505 K01510 - gmx:100806446 717.613