Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03462 ATGGAGGTTAAGAGAAAGATAATCTTGTGTTTAATGATGTCCATCACAATAGGGTATAGAACTGAAGGGAGAGACCCTGTCTTGCATAAGGTTGGAGGAGGAAGGTATACTTGGGAACCTAAAGTTAATTTCACAAAGTGGGCAAGTCATGAGCACTTCTACAGGGGTGATTGGCTATATTTTGGTTTTGACAAACAAATCTATAATGTTCTAGAGGTGAATAAAACAAATTATGAAAAATGTATTGATAATGAATTCATAAACAACATCACAAGAGGAGGCAGAGATGTTTTCCAACTCCTAGAGGCAAGGCCATATTATTTTCTATGTGGTAGAGGCTTTTGCTTTCAAGGGATGAGGTTTACAGTAAATGTAGAAGCGCAGCCCCTATTAGCACTATCTCCAACAATGCCCAACAAGGCATTTTCATCAAGTCATACCAAACTGCTTGTCCTTTTGGTCACGATTTTGTTTTGTATCTTCATGTAA 489 0.3783 MEVKRKIILCLMMSITIGYRTEGRDPVLHKVGGGRYTWEPKVNFTKWASHEHFYRGDWLYFGFDKQIYNVLEVNKTNYEKCIDNEFINNITRGGRDVFQLLEARPYYFLCGRGFCFQGMRFTVNVEAQPLLALSPTMPNKAFSSSHTKLLVLLVTILFCIFM. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03462 162 FunFam Lamin-like protein 25 128 - -
Seca5g03462 162 SUPERFAMILY Cupredoxins 29 125 IPR008972 -
Seca5g03462 162 Gene3D - 27 129 IPR008972 -
Seca5g03462 162 Pfam Plastocyanin-like domain 38 119 IPR003245 GO:0009055
Seca5g03462 162 ProSiteProfiles Phytocyanin domain profile. 27 127 IPR003245 GO:0009055
Seca5g03462 162 PANTHER BLUE COPPER PROTEIN 28 133 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03462 Seca-Chr5 91370492 91371072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03462 28 150 Phytocyanin Superfamily AT2G27035 57.724 1.84e-54 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03462 - - gmx:100789719 248.054