Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03450 | ATGAATGGGCAAAAAATTAAGCGCCGAGTGGGTAAATATGACATAGGGAGGACCATTGGTGAGGGAACATTTGCAAAAGTGAAATTTGCAAGGAACTCTGAGACTGGGGAGCCTGTGGCTCTTAAGATTCTTGACAAGGAGAAGGTTCTCAAGCATAAGATGGCTGAGCAGATCAGGCGAGAAATAGCTACAATGAAGTTAATCAAGCATCCAAATGTTGTTCAACTACATGAGCACATGATGCAGAATTACATATTTCATTTGCAGGTCATGGGGAGCAAGACAAAAATATATATTGTTTTGGAGTTTGTGACTGGGGGGGAGCTCTTTGACAAAATTGTAAACCATGGACGGATGGGTGAAAAGGAAGCTCGTAGGTATTTCCAGCAGCTTATAAATGTTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAACCAGAAAACTTGCTATTAGATGTTTGTGGGAACCTTAAAGTTTCTGATTTTGGGTTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGCGGGACTCCAAATTATGTTGCTCCTGAGGTCCTTGAGGACAGAGGCTATGATGGAGCAACTGCAGACTTGTGGTCATGTGGTGTGATCCTCTTTGTGTTGCTTGCAGGTTACTTGCCTTTCGATGACTCTAATCTTTTGAACCTGTATAAAAAAATTTCAGCTGCTGACTTTACTTGCCCCCCATGGATTTCTTTTAGTTCCAGGAAATTGATAACTAGAATCTTGGATCCGAATCCCATGACTCGTATCACTATACCTGAGATTTTGCGTGATGAATGGTTTAAGAAAGACTATAAACCTCCAGTTTTTGAGGAGAGAAGGGAGACCAACCTTGATGACATAGAAGCCGTCTTCAAAGATTCTGAAGCACACCTTGTGACAGAGAAGAAGGAACAGCAGCCAACATCTATGAATGCATTTGAATTAATATCCATGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGACATAGACCAGGGATTTAAAAGGGAAACCAGGTTCACATCAAAACGTCCTGCCAATGAGATAATCAACAAGATTGAAGAAGTTGCAAAGCCTCTTGGTTTTGATGTGCAGAAGAAAAATTACAAGATGAAGCTTGAAAATGTGAAAGCTGGAAGGAAGGGAAACCTGAATGTTGCCACTGAGATATTTCAAGTGGCACCTTCTCTTCATGTGGTTGAGGTTCGGAAAGCAAAAGGTGATACATTGGAGTTCCATAAGTTCTACAACAATCTTTCAACATGCCTGGAGGATGTTGTTTGGAAAACCGAAGATGATATGCAAGAAACAAAGTGA | 1353 | 0.4146 | MNGQKIKRRVGKYDIGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKLIKHPNVVQLHEHMMQNYIFHLQVMGSKTKIYIVLEFVTGGELFDKIVNHGRMGEKEARRYFQQLINVVDYCHSRGVYHRDLKPENLLLDVCGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLEDRGYDGATADLWSCGVILFVLLAGYLPFDDSNLLNLYKKISAADFTCPPWISFSSRKLITRILDPNPMTRITIPEILRDEWFKKDYKPPVFEERRETNLDDIEAVFKDSEAHLVTEKKEQQPTSMNAFELISMSKGLNLENLFDIDQGFKRETRFTSKRPANEIINKIEEVAKPLGFDVQKKNYKMKLENVKAGRKGNLNVATEIFQVAPSLHVVEVRKAKGDTLEFHKFYNNLSTCLEDVVWKTEDDMQETK. | 451 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03450 | 450 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 6 | 430 | - | - | |
Seca5g03450 | 450 | Pfam | NAF domain | 319 | 378 | IPR004041 | GO:0007165 | |
Seca5g03450 | 450 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 42 | IPR017441 | GO:0005524 | |
Seca5g03450 | 450 | ProSiteProfiles | NAF domain profile. | 317 | 341 | IPR018451 | GO:0007165 | |
Seca5g03450 | 450 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 286 | - | - | |
Seca5g03450 | 450 | ProSiteProfiles | Protein kinase domain profile. | 13 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03450 | 450 | FunFam | Non-specific serine/threonine protein kinase | 4 | 103 | - | - | |
Seca5g03450 | 450 | FunFam | Non-specific serine/threonine protein kinase | 316 | 441 | - | - | |
Seca5g03450 | 450 | Gene3D | Phosphorylase Kinase; domain 1 | 3 | 103 | - | - | |
Seca5g03450 | 450 | SMART | serkin_6 | 13 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03450 | 450 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 309 | IPR011009 | - | |
Seca5g03450 | 450 | Gene3D | Kinase associated domain 1, KA1 | 316 | 441 | - | - | |
Seca5g03450 | 450 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 143 | 155 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g03450 | 450 | Pfam | Protein kinase domain | 13 | 279 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03450 | 450 | FunFam | Non-specific serine/threonine protein kinase | 6 | 320 | - | - | |
Seca5g03450 | 450 | CDD | STKc_SnRK3 | 12 | 278 | - | - | |
Seca5g03450 | 450 | CDD | CIPK_C | 323 | 432 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03450 | Seca-Chr5 | 91236020 | 91242065 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03450 | 4 | 422 | CBL-interacting serine-threonine protein kinases | AT2G26980 | 78.282 | 0.0 | 686 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Seca5g03450 | Pkinase | 6.4e-68 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03450 | - | - | pvy:116136070 | 800.816 |