Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03441 ATGGCCATTGAACCAAAGCGTGTGGTGGTGATACAGGATGCATCTAAAGAACTAAATTTGAGAGTTTTTTATTGGATTGTAAATGGCTTGTCACTTAAATCAGCAGATATGGTCACCCTTCTTGCAATCCTGCATGAGGTTTACACTCCTATGGGATACAGAAGCACTGTGAACAACAGCTTAATACTTGGAGCAAACCAGAGGATCATTGATGAACAACTTGCAAGGAAGAAAGGAGAGTATCTGCAACATGAGGGCCTTGCTAGGGTTGCTAAACTGTATGAATCAAATAAGGTATCATTTAAGATACAGATATTTACAGGATCTTCACCGAAAGATGTTGCTCTAAAAGAATCCATAAACCTAAAGGCAACTTGGGTGATACTTGACAGGCAAATGAAGAAAGATGAAGAGTTTTTCCTGCAGAAGCTTTCTTGTGGTATATCTAGATTAAGGCGTAACAACCGGATAGTACGCTTAAGAGGACCTCTAGATCTCGCTGTTGAAATACAATGTAACAGCCATGAAACATTTGATGAAAGTTTACCAGAATGTCCTTATGAAGATCTTTTTGGTGATGTTGTCCCTGAGAGTCCAATCAAAGTTAATGGGGTGAACCAGATACACTGTAGGCAAGATGAGGAAGAGGGGTGCTCAACATTTACTACTAATATTAATGAAAAACCATGTCAGACAAGTCCTGATCACCCTGCTATGGAAGAAACAGACATAAACACTAGCCAAACGATAGGTAATACAGAGGGAGATAAACAATTCCAGAATCAAGGACAGATACAAAGCATGCCCCTTGAGGATATGAGGGACACAACACTTGTGATTAACAATGATCAAGCAACTACTCAAGAAATAACTGATCAACTCAGCCAGGATGTAGAAAAGACACACAACTTCTTCCATGATGAGGATTGGGACTTGAGGCATCGAACAAAGAGTAAAGAAATGATTGATCAAACAAAAGATGATCAACTGATCCAGAATCAAGCACAACAGACACAAGGAATTTCCCATGTGGGTATATTGGATGGACAGCAAGAGAAAAATATTTTGGAAAATTCATTGTGCATTATGTGCTCAGTCTGCAAAAATAGAAGACTTAATATTGAATGGCAAAAGGAATTCACTTATGAGGAACTACAAGCAGCCACAGATGGATTTTCATTGAAAAATTGTCTCTCTGAATGTGGATATCCATTTTCAACTTGTAGAGGCCAGCTGGAGGGAGAGATGAAAATAGTAGTTAAACAGCATGAAATAACAAATCCACAAGTAAGGGAAAAAATCAAGTCAGAAGTCCAAACCATCCTCAAAGCTAGACATAAGAATGTGGTCATGCTATTGGGTTCAACTACAAAAGATCATTTCCTGTTGATTGTATATGAGTATGCATGCAATGGTTCACTTGACAAGTATCTATCAAGGGAAAGCTGCAGACCATTGACCTGGAGTGAAAGGCTGAGAGTGGCAATAGGTCTTGCCAGAGGTCTAAAGTACCTACATGACAATAACATTATCCATGGAAATATTAAACCAAGTAATATTCTTCTAACACATGACTTCAAACCACTGCTTGGAGATTTTGGCTTTGGGAAAAAACTTGAATTGATGTCCCACAAAAATAAAATAGGGAAATCTGAATACATAGCACCAGAGTATCAGGAGAAGGGGACACCATCAACTAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGTTGATCACTGGACACAAGGCTACAGACAAAATATCAGGAGAGAAAACCCTTGTTGGATGGGCAAAGCCTCTTCTTGCAGCAAAGAAGTATTCAGAGTTGGTGGATCCCATAGTCAGAAACTCATATGAAGATGACCAACTCCGTTGGCTGGTCCAAGTAACGGCACAATGTCTCAAAAAGAAACCTAAGGAAAGATTATCCATGAATATGGTTGTTTCTGCATTACAAGGAATAGAAGATAGTGAACAATGCCACATTACAGAAGATATTACTCCAGCTACATCATCTTCAGGAATGGTGCCTGACATGAATGGTTCTCAAGTTCAGGCTACAAATACAATACAAGGCATAGCAGACAGCAAAAAATGCTATATGACAGAAGACTTTACTCTAGCTGTATCACATTCAAGATCTGTTCAAGACATAAATGGCTCACAAGGTCCAGAAGAAGCTGATCAACCAGGTCAGAATGAGGATCAGATAGAAAGCAGCTCTTTTGGGGAGGAAAGGAGTTTAAGGCTAAGAGTTGAAAATAATCACTTTTACATGATGAACCAGCCGGGAAACTCTGATGCACTAAACCAGATTGAAGAACAGATGCATAGCAGACCCAGAGGGGAGGAGATGAGCTCAGGAAAGATGAGAAGTGACCACATGATGGATCAGACAGTAGTTGATCAGCTGAGTGAATTTGAAGAACATATGAAGAGCACCCTCAATGGAGAGGGCATCTCAACACAGACAATTAGCATTAACCACATGATAGATCAGACAAAAGTTGACCAGGTGAACCAGGATCAAGAAGAGGAGAAGAGCTTTGTTCAAATGGAGAGAGGCTTAAGACCAGCACCTATGAGTGGAATGATAGATCAAACACAACTTCAGAGCAGTTCCCATGATAATTTATTGGATGGAAATCAAGGTGAAATCATTTTGGAGAATTCAAAATCCTCTGTATGCTCTATTTGCAAAAGTAAACGCCCAAGCATTGCATGGATGAAGGACTTTCTTTATGATGATCTCCTAGAAGCTACAGAAGGATTTTCGGTTAAGAATTCTCTATCTGAAAGTGAAGATGGACCTACTTTTAAAGGTCTGCTAGACAAAAAGGTGAAAATAGTTGTTAAGAAATATCAAATTACAAGGTCTGAGGAAGAGCAGATGTTCAAGTCAGAAGTCCAGTTGCTCACCAATGTTAGGCATAAAAATGTGGTCTTGCTGTTGGGTTTATGTACAGACAAAAGTCAATTGATGATTGTGTATGAGCAAGTATGCAATGGTTCTCTTGATCATTTCCTATCAAGGGGGAATTTCCAGTCATTGACCTGGAAGGAAAGGATGGAAGTAGCAGTAGGTACTGCCAGAGGTTTGAAATACCTACATGGGAATAACATAATTCATGGAAATATAAAATCAAGTAACATTCTTCTAACACATGACTTTCAACCACTGATTGGAGACTTTGGCTTTGGAAAAATGAAACTTGAACCAAAGAAATCCTACAAAAATAAAAATGTAAGAGATTCTGGATATATAGCACCTGAGTATCTGGATAGTGGGAAACTATCAACTAAGGCAGATGTGTACTCCCTTGGAGTGGTTCTTTTAGAGTTGATCACTGGCCGGAGGGCCACAGACAAACTACCAGGAGGAAAAAGCCTTGTTGGATGGGCAAGGCCCCTACTGGGAGGAAAGAAGTACCTACAGTTAGTGGATCCAAAGATCAGTAACTCCTATGATGATGAACAACTTCTATGGCTGGTCCAAGTAACAGAACAATGTCTCAGAAAGAATTCTAAGGACAGATTTACAATGAATATGGTTGTATCTGCATTACAAGGCATAGCAGAATCAAATGAGTGTTGTGTGATTGAAGATTCTTCCCCAGAAAAGCCATATTTACCTCATGATGAGCCTGCTATGACTAGTTCACAAGGTAATTTAGGAAAACTACAACATGAGGGGATGAAGGAGGGACTTAACATTAACCAAATGATAGGCCAAATGAAGGCTGATCCGGTGAGCCGGAAACAAGGATGGATAGACAGAAACACAAATGAGGAGGAAAGAAGCTTCAGATTAGAAATTAAAACTGATCACATGATAGGTCAGAATAAAGATGATCAGCTGAAACAGGATGGAGAAGAGATGCAGAGCAGGCCTCATGGGGAGGAGATGTCCAGAGTGACAATTATAAGTAATCACATAATTGAACAGATGAAACCTGATCAACAGATCCAAAGTAATCAACAGCATATTAAGGAAAGCTTCTGCATAGATGAGATAGATAAACAACAAAAGGTGAGCAAGGATGAAAAACAAATGCAAGGCAAAATCATTTTGGAGAATTCAAAGCCTTCTCTATGCTCAATCTGCAAAAGTAGACGCCCAAATAATGGATGTGAAAAGACATTTACTTATGAAGAACTTCAATCTGCTACAGAAGGATTTTCAATTATGTATTCTCTATCTGAGGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGATAATAAGCTGAAAATAGTTGTTAAGAAACATGAATTCACAAGCTTTCACGAGGAGAAGATGTTTATGTCAGAAGTCCAGTTGCTCACAAATGCTAGACATGAAAATTTGATCATGCTGTTGGGTTCATGCATTCGAGAAAATCAATTGCTAACTGTATATGAGCATGCATGCAATGGTTCACTTGACAAGTACTTATCAAGGGCAAGTGTTATATCATTGACTTGGAGAGAAAGGGTGAAAATTGCAGTAGGTGTCTCCAGAGGTCTAAAGTATCTACATGATAATCACATAATACATGGAAGAATGAAACCAAGTAACATTCTTCTAAATCATGATTTTAATGCCATGATAGGAGATTTTGTGTTTGGAAAAGAAAGAAATGAATTCAAGAATAGCCTCAAAGATAAAAGCACGCGGAATTGTGGATACACTGCACCAGAGTGTCAGGAGAGTGGAAAACTATCAACTAAGGCAGATGTGTACTCTTTTGGTGCTGTTCTTTTAGAGTTGATCACTGGCTGTATGATTTCAGAGAAGGTATCAAGAAGGAAATGTCTTATTGAATGGGCAAGGCCACTTCTTGGAGGAAGGAAGTATCTACAACTGGTGGATCCCCAAATCAGCAGCTCCTGTGATGAACAAGAACTTACTTCATTGGTCCAAATAACAGAAAAGTGTCTCAGAAAGAATCCTAAGGAAAGGTTCACAATGAACATGGTTGTCTCTGCAATGCCATGTGTAGTTGATAGCAATGACATCTATGTGACTGAAGAATCTTCATCAGAAAAGTCATATGTAGAAATAGAATGCAGTGCTTCAGATGTTACAGGATCTAAAGTTAAGGACGAATTACTGGAAGAAGAAGAAGAAGAAGATGATTTAGGCTCAGAGATTAGTGAAGAAAGAGATGAAAACATAACTTGTAGTAGAAGCAACAGTGTAACTGTAACAGACATTGGTCAAGTGAGGGATAACTACACAACATGTGGTGAAAGCTGTGAGGAAACACAAGAAAAAGAAAGCACAAGCACCAAGGTATGTCTAGAAAGGGAAAGGTGGGAATCTTATGGTGGAGCTAGAGACTTTTTTCTTGAAGGGGCTCAAGAGTATACAGTTGCGCTGCAGCGCAGGTTGAAGCGCAGATCTGTGCTGCAGGTTGAAGCACAGCTCGCAGATTTCTATTTTTGA 5436 0.3924 MAIEPKRVVVIQDASKELNLRVFYWIVNGLSLKSADMVTLLAILHEVYTPMGYRSTVNNSLILGANQRIIDEQLARKKGEYLQHEGLARVAKLYESNKVSFKIQIFTGSSPKDVALKESINLKATWVILDRQMKKDEEFFLQKLSCGISRLRRNNRIVRLRGPLDLAVEIQCNSHETFDESLPECPYEDLFGDVVPESPIKVNGVNQIHCRQDEEEGCSTFTTNINEKPCQTSPDHPAMEETDINTSQTIGNTEGDKQFQNQGQIQSMPLEDMRDTTLVINNDQATTQEITDQLSQDVEKTHNFFHDEDWDLRHRTKSKEMIDQTKDDQLIQNQAQQTQGISHVGILDGQQEKNILENSLCIMCSVCKNRRLNIEWQKEFTYEELQAATDGFSLKNCLSECGYPFSTCRGQLEGEMKIVVKQHEITNPQVREKIKSEVQTILKARHKNVVMLLGSTTKDHFLLIVYEYACNGSLDKYLSRESCRPLTWSERLRVAIGLARGLKYLHDNNIIHGNIKPSNILLTHDFKPLLGDFGFGKKLELMSHKNKIGKSEYIAPEYQEKGTPSTKTDVYSFGVVILELITGHKATDKISGEKTLVGWAKPLLAAKKYSELVDPIVRNSYEDDQLRWLVQVTAQCLKKKPKERLSMNMVVSALQGIEDSEQCHITEDITPATSSSGMVPDMNGSQVQATNTIQGIADSKKCYMTEDFTLAVSHSRSVQDINGSQGPEEADQPGQNEDQIESSSFGEERSLRLRVENNHFYMMNQPGNSDALNQIEEQMHSRPRGEEMSSGKMRSDHMMDQTVVDQLSEFEEHMKSTLNGEGISTQTISINHMIDQTKVDQVNQDQEEEKSFVQMERGLRPAPMSGMIDQTQLQSSSHDNLLDGNQGEIILENSKSSVCSICKSKRPSIAWMKDFLYDDLLEATEGFSVKNSLSESEDGPTFKGLLDKKVKIVVKKYQITRSEEEQMFKSEVQLLTNVRHKNVVLLLGLCTDKSQLMIVYEQVCNGSLDHFLSRGNFQSLTWKERMEVAVGTARGLKYLHGNNIIHGNIKSSNILLTHDFQPLIGDFGFGKMKLEPKKSYKNKNVRDSGYIAPEYLDSGKLSTKADVYSLGVVLLELITGRRATDKLPGGKSLVGWARPLLGGKKYLQLVDPKISNSYDDEQLLWLVQVTEQCLRKNSKDRFTMNMVVSALQGIAESNECCVIEDSSPEKPYLPHDEPAMTSSQGNLGKLQHEGMKEGLNINQMIGQMKADPVSRKQGWIDRNTNEEERSFRLEIKTDHMIGQNKDDQLKQDGEEMQSRPHGEEMSRVTIISNHIIEQMKPDQQIQSNQQHIKESFCIDEIDKQQKVSKDEKQMQGKIILENSKPSLCSICKSRRPNNGCEKTFTYEELQSATEGFSIMYSLSEGEYGPAFRGQLDNKLKIVVKKHEFTSFHEEKMFMSEVQLLTNARHENLIMLLGSCIRENQLLTVYEHACNGSLDKYLSRASVISLTWRERVKIAVGVSRGLKYLHDNHIIHGRMKPSNILLNHDFNAMIGDFVFGKERNEFKNSLKDKSTRNCGYTAPECQESGKLSTKADVYSFGAVLLELITGCMISEKVSRRKCLIEWARPLLGGRKYLQLVDPQISSSCDEQELTSLVQITEKCLRKNPKERFTMNMVVSAMPCVVDSNDIYVTEESSSEKSYVEIECSASDVTGSKVKDELLEEEEEEDDLGSEISEERDENITCSRSNSVTVTDIGQVRDNYTTCGESCEETQEKESTSTKVCLERERWESYGGARDFFLEGAQEYTVALQRRLKRRSVLQVEAQLADFYF. 1812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03441 1811 ProSiteProfiles Protein kinase domain profile. 1396 1663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g03441 1811 MobiDBLite consensus disorder prediction 1695 1722 - -
Seca5g03441 1811 Pfam Protein tyrosine and serine/threonine kinase 1399 1659 IPR001245 GO:0004672|GO:0006468
Seca5g03441 1811 Pfam Protein tyrosine and serine/threonine kinase 931 1190 IPR001245 GO:0004672|GO:0006468
Seca5g03441 1811 Pfam Protein tyrosine and serine/threonine kinase 413 654 IPR001245 GO:0004672|GO:0006468
Seca5g03441 1811 MobiDBLite consensus disorder prediction 716 741 - -
Seca5g03441 1811 SUPERFAMILY Protein kinase-like (PK-like) 1380 1658 IPR011009 -
Seca5g03441 1811 Gene3D Transferase(Phosphotransferase) domain 1 470 675 - -
Seca5g03441 1811 Gene3D Transferase(Phosphotransferase) domain 1 1003 1209 - -
Seca5g03441 1811 Gene3D Transferase(Phosphotransferase) domain 1 1473 1687 - -
Seca5g03441 1811 FunFam Proline-rich receptor-like protein kinase PERK8 889 1002 - -
Seca5g03441 1811 ProSiteProfiles Protein kinase domain profile. 382 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g03441 1811 Gene3D Phosphorylase Kinase; domain 1 891 1001 - -
Seca5g03441 1811 Gene3D Phosphorylase Kinase; domain 1 1362 1471 - -
Seca5g03441 1811 MobiDBLite consensus disorder prediction 1700 1715 - -
Seca5g03441 1811 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 469 667 - -
Seca5g03441 1811 MobiDBLite consensus disorder prediction 716 748 - -
Seca5g03441 1811 SUPERFAMILY Protein kinase-like (PK-like) 376 654 IPR011009 -
Seca5g03441 1811 Gene3D Phosphorylase Kinase; domain 1 367 468 - -
Seca5g03441 1811 Coils Coil 1700 1720 - -
Seca5g03441 1811 ProSiteProfiles Protein kinase domain profile. 927 1213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca5g03441 1811 FunFam Proline-rich receptor-like protein kinase PERK8 1358 1471 - -
Seca5g03441 1811 SUPERFAMILY Protein kinase-like (PK-like) 910 1191 IPR011009 -
Seca5g03441 1811 PANTHER OS01G0253100 PROTEIN 849 1198 - -
Seca5g03441 1811 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1003 1202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03441 Seca-Chr5 90924146 90937173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03441 380 674 Trihelix Transcription Factor Family AT5G38560 38.188 2.53e-53 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Seca5g03441 PK_Tyr_Ser-Thr 2.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03441 - - gsj:114401847 2144.39