Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03431 ATGGCTACCACCTTGGATCTAATGTTCCTTTTCAAAGAAATCTTAGTATCCATTCTAATCTTCTTGATCACCCGTTTCTCCTTCCATTCACTTCTAAAAAACAACCGGAAACTTCCACCAGGACCAAAAGGGTGGCCAGTTTTAGGCGCACTCCCACTAATGGGAAGTATGCCACATGTGACCCTCTCAAAAATGGCCAAAAAATACGGACCCGTAATGTACCTCAAAATGGGCACTAACAACATGGTTGTGGCCTCTACACCTTCAGCAGCCAAAGCATTTCTCAAAACACTTGACCAAAACTTCTCCAATAGGCCTCCAAACGCAGGTGCAACTCACTTAGCTTATGACTCACAAGACTTGGTGTTTGCTGATTATGGTTCAAGGTGGAAGTTGCTTAGGAAATTGAGCAACTTGCACATGCTTGGTGGAAAGGCTCTTGATGATTGGGGACATGTTAGGGAAGTAGAGATGGGTTACATGATTGGTGCAATGTATGATTGTGGTAAGAAAGGTGAAGCTGTTGTGGTGCCTGAGATGTTGACATATGCTATGGCTAATATGGTGGGTCAAGTCATATTGAGTCGACGTGTGTTTGAGACTAAAGGTGAGGAGTCTAATGAGTTTAAGGATATGGTTGTTGAGTTGATGACGGTTGCGGGGTACTTTAATATTGGGGATTTTATCCCGGTTCTTGGGTGGTTGGATTTGCAAGGCATAGAGCGTGGGATGAAGAGCTTGCATAAGAAGTTTGATGCATTGTTGACGAGGATGATTGAGGAACATTCGAGTTCTAGTTATAAGAGAAAGGATAAGCCTGATTTCTTAGATGTTGTCATGGCTTACCAAAATGATAACTCCGATGGGGAGAAATTGTCGCTTACTAACATCAAGGCACTACTCTTGAACCTATTTACAGCAGGCACAGACACATCCTCAAGTATCATAGAGTGGGCACTAGCAGAGATGATGAAAAACCCATCCATTATGCGAAGAGTTCATGAGGAAATGGACCAAGTCATAGGAAAAGATCGACGCCTTCAAGAATCAGACTTAGCGAAGCTTCCATACTTTACAGCGGTTTGCAAAGAGACATACAGAAAGCACCCATCAACGCCACTAAACTTGCCTCGAGTGTCCACAGAAGCATGTGTAGTGAATGGGTATTACATCCCCAAAAACACAAGGCTCAGTGTAAACATATGGGCCATAGGACGAGACCCTGATGTGTGGGAAAGCCCATTGGAGTTTAATCCAGATAGATTTCTCACTGGCAGGAATGCTAAAATTGATCCACGTGGCAATGATTTTGAGCTAATTCCATTTGGTGCTGGGAGAAGGATTTGTGCTGGGACTAGGATGGGGATTGTGCTAGTTCAGTACATTTTGGGCACTTTGGTGCATTCATTTGATTGGAAGCTACCAAATGGTGTTGGAGAGTTGGATATGGAAGAGGCCTTTGGGCTTGCCTTGCAGAAAAAGGTCCCTCTTGCTGTTATGGTTACCCCTAGGTTGGCCCCAAGTGCTTACATTTCTTAG 1539 0.4392 MATTLDLMFLFKEILVSILIFLITRFSFHSLLKNNRKLPPGPKGWPVLGALPLMGSMPHVTLSKMAKKYGPVMYLKMGTNNMVVASTPSAAKAFLKTLDQNFSNRPPNAGATHLAYDSQDLVFADYGSRWKLLRKLSNLHMLGGKALDDWGHVREVEMGYMIGAMYDCGKKGEAVVVPEMLTYAMANMVGQVILSRRVFETKGEESNEFKDMVVELMTVAGYFNIGDFIPVLGWLDLQGIERGMKSLHKKFDALLTRMIEEHSSSSYKRKDKPDFLDVVMAYQNDNSDGEKLSLTNIKALLLNLFTAGTDTSSSIIEWALAEMMKNPSIMRRVHEEMDQVIGKDRRLQESDLAKLPYFTAVCKETYRKHPSTPLNLPRVSTEACVVNGYYIPKNTRLSVNIWAIGRDPDVWESPLEFNPDRFLTGRNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVQYILGTLVHSFDWKLPNGVGELDMEEAFGLALQKKVPLAVMVTPRLAPSAYIS. 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03431 512 PANTHER CYTOCHROME P450 98A9 13 508 - -
Seca5g03431 512 Pfam Cytochrome P450 39 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 FunFam Flavonoid 3',5'-hydroxylase 2 30 501 - -
Seca5g03431 512 SUPERFAMILY Cytochrome P450 39 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 CDD CYP75 70 504 - -
Seca5g03431 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Seca5g03431 512 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03431 512 Gene3D Cytochrome P450 31 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03431 Seca-Chr5 90773049 90775980 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03431 10 510 Cytochrome P450 AT5G07990 49.409 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03431 K13083 - gmx:547705 874.774