Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03417 ATGGACAATAATTCAAAAGTTGAATTTGCTCACCAACGAACACTTATATCAGATGAGCTATACGAGTCAATTAAATCTAGTTGTAATGGTGATTATATCAATCGCGATCCAAACAATACAAATTGTAAGTTAGATTATGAAGCCTTCTTTGAGTTAGTTCGTTATATAAATGAATTTCAAATTATGGAACCAAGTTGTATGCGTGGATCTTACGAGAATCAAAGAGTTCTTTCTGAAGGTATCCGCAATAGAAGATTTAGGTGTCGGGATGACGACTATGCGGTTGGTGAATTATGGGCAAATGATCCACATGTTCGAAAGGCTCTACACGTTAGGGAGGGAACCAAAGGGCACTTCCAAAGATGCAATCGTAGTATGGCCTATACAAAGAACGTTCATAGTGTTGTTGAATGTCTTCGAAATCTCACCCACACAAATCTTCAATCTCTAATTTATTGTGGTGATCTAGACATGTCGATACCGTATCTTAGTTCACTTTCTATTGTCAAGTCAATGAATTTGAATTTGGATAGGACTTGGCATCCATGGTTCGTTGATGGTGAAGTGGCAGGGTTAGTTTAA 582 0.3746 MDNNSKVEFAHQRTLISDELYESIKSSCNGDYINRDPNNTNCKLDYEAFFELVRYINEFQIMEPSCMRGSYENQRVLSEGIRNRRFRCRDDDYAVGELWANDPHVRKALHVREGTKGHFQRCNRSMAYTKNVHSVVECLRNLTHTNLQSLIYCGDLDMSIPYLSSLSIVKSMNLNLDRTWHPWFVDGEVAGLV. 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03417 193 Gene3D alpha/beta hydrolase 1 193 IPR029058 -
Seca5g03417 193 SUPERFAMILY alpha/beta-Hydrolases 3 193 IPR029058 -
Seca5g03417 193 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 187 IPR001563 GO:0004185|GO:0006508
Seca5g03417 193 Pfam Serine carboxypeptidase 2 192 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03417 Seca-Chr5 90624240 90625618 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03417 86 191 Calmodulin-binding Proteins AT2G22960 33.019 7.87e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03417 K16296 - gmx:100791997 311.227