Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03411 ATGCGTGGATCTTACGAGAATCAAAGAGTTCTTTCTGAAGGTATCCGTAATAGAAGATTTAGGTGTCGGGATGACGACTATGCGGTTGGTGAATTATGGGCAAATGATCCACATGTTCGAAAGGCTCTACACGTTAGGGAGGGAACCAAAGGGCACTTTCAAAGATGCAATCGTAGTATGGCCTATACAAAGAACGTTCATAGTGTTGTTGAATATCTTCAAAATCTCATCCACACAAATCTTCAATCTCTAATTTTCTGTGGTGATCTAGATTCTAGACATGTCGATATCGTATCTTAG 300 0.4 MRGSYENQRVLSEGIRNRRFRCRDDDYAVGELWANDPHVRKALHVREGTKGHFQRCNRSMAYTKNVHSVVEYLQNLIHTNLQSLIFCGDLDSRHVDIVS. 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03411 99 Gene3D alpha/beta hydrolase 3 94 IPR029058 -
Seca5g03411 99 Pfam Serine carboxypeptidase 27 92 IPR001563 GO:0004185|GO:0006508
Seca5g03411 99 SUPERFAMILY alpha/beta-Hydrolases 7 92 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03411 Seca-Chr5 90568141 90571099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03411 20 91 Calmodulin-binding Proteins AT2G22960 34.722 8.97e-10 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03411 K16296 - gmx:100791997 131.339