Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03390 | ATGCAGATGCTCAATCGACAAGTGGTTAAATCAGAATCTGCTACCATTAAGATACTTGAACTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGGATACTAATGCGGGCTGCTGATGAACTTCAGGCCCTCCAAGAAGAACGCAGAAAAGTGGCTCCAGAGACTGCTGAAGCAATTGATCAGTTCTTGGTCAAATTGCGAGCCTGTGCAACAGGGGATTCATCCTTCATGTTTATTCTTGATGATCCTGCAGGAAACAGCTTCATTGAAAACCCGTTTGCACCGTCATCTAATCCATCCCTAACTATCAAGTTTTATGAGCGAACTCCTGAGCAACAAGCATCATTGGGATATCTTGTTGATTCTACACAAATTGAAGGAACTCGTGATGAAGCACCAGGAGGGGGAGAAGCTGTAGCTGCTAATCAAATGAGAGAACCACATGGGTCAGTAGGGGCAGCAGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCAGAAATTGCAGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTGCCAGTCCGTGCGAAACACGAATGTTCGTCACCAGTATCTTTTTACCATTTTGCATATTGCCATTTGAATATGCTTTGCCTGTGTTTGTTACATTTATTTACGATTATCTATCATTTTAG | 714 | 0.4412 | MQMLNRQVVKSESATIKILELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERRKVAPETAEAIDQFLVKLRACATGDSSFMFILDDPAGNSFIENPFAPSSNPSLTIKFYERTPEQQASLGYLVDSTQIEGTRDEAPGGGEAVAANQMREPHGSVGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACASPCETRMFVTSIFLPFCILPFEYALPVFVTFIYDYLSF. | 238 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03390 | 237 | Pfam | ZPR1 zinc-finger domain | 3 | 97 | IPR004457 | GO:0008270 | |
Seca5g03390 | 237 | Gene3D | ZPR1, A/B domain | 1 | 125 | IPR042451 | - | |
Seca5g03390 | 237 | FunFam | zinc finger protein ZPR1 | 1 | 125 | - | - | |
Seca5g03390 | 237 | Gene3D | ZPR1, zinc finger domain | 183 | 222 | IPR042452 | - | |
Seca5g03390 | 237 | SMART | zpr1 | 1 | 98 | IPR004457 | GO:0008270 | |
Seca5g03390 | 237 | Coils | Coil | 34 | 54 | - | - | |
Seca5g03390 | 237 | PANTHER | ZINC FINGER PROTEIN ZPR1 | 2 | 211 | IPR040141 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03390 | Seca-Chr5 | 90366167 | 90368868 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03390 | 1 | 211 | C2H2 Transcription Factor Family | AT5G22480 | 72.038 | 1.15e-103 | 307 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03390 | K06874 | - | gmx:100798741 | 367.081 |