Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03389 ATGGAAGGCAATAATAGAGAGGAGATTGTGGATGTTGGATCAGTGGTAGAAGTTGTTTCTGCTGACGACGGTGACGCCCCTCTTTACAACCTCGAAAGCCTCTGCATGCGTTGTGGTCAAAACATTTTGTTGTCAGCTTTTGAATGTCCTCACTGTGGTGAGAGAAACAATGAAGTACAGTTTGCTGGTGAAATTCAACCACGTGGTTGTTGTTACTCTTTGGAGATCCCATCAGGTGAACAGAAGGTTGTGTTGATTTGA 261 0.4406 MEGNNREEIVDVGSVVEVVSADDGDAPLYNLESLCMRCGQNILLSAFECPHCGERNNEVQFAGEIQPRGCCYSLEIPSGEQKVVLI. 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03389 86 Pfam ZPR1 zinc-finger domain 40 80 IPR004457 GO:0008270
Seca5g03389 86 PANTHER ZINC FINGER PROTEIN ZPR1 18 80 IPR040141 -
Seca5g03389 86 Gene3D ZPR1, zinc finger domain 40 63 IPR042452 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03389 4 83 C2H2 Transcription Factor Family AT5G22480 57.292 2.91e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03389 K06874 - gmx:100814878 135.191