Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03372 ATGGAGGAGTTTATGAAATACCATTTTGCTGATCTTGAGGTTGCATTTAAGTGTTATAATTGGTATGCTAGACGAAAAGGATTTTCTGCGCGTAAGGACAAGGTTGGTAAGAACAAAGCTAAAGTTGTTATACGACAGATATTTGTGTGCTCTAGGGAAGGTTTTCCTAAAGTCAAGGAAGGAAGTTATAAAAGGGAACGAAGAAGAATTATAAGATGTGGATGTAAAGCACATTGCAAGATGAGGTTGAACGCTGATAATAATCGTTGGCATGTGACTTCATTTGTGGAAAACCACAATCATGCCATGTTGGAGCAGAGGTTCCATGGCATGCTACCGTCCCATAGGAGGATGGAGGAGCATGAAATAGAAGTCATGAACCAGATGAGAGGTGTTGGAATTAGCACGCCTAGCATATACCAAGCTTTTGCAAGTCAGACAGGTAGATTTGAGAATGTTGGGTTTAAGACGAGTGATATGTACAATTAG 489 0.4008 MEEFMKYHFADLEVAFKCYNWYARRKGFSARKDKVGKNKAKVVIRQIFVCSREGFPKVKEGSYKRERRRIIRCGCKAHCKMRLNADNNRWHVTSFVENHNHAMLEQRFHGMLPSHRRMEEHEIEVMNQMRGVGISTPSIYQAFASQTGRFENVGFKTSDMYN. 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03372 162 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 2 152 - -
Seca5g03372 162 Pfam FAR1 DNA-binding domain 19 104 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03372 Seca-Chr5 90110077 90110565 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g03372 FAR1 1.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03372 - - mtr:112417197 150.214