Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03337 | ATGGCAACTCCTCTTTCTTTCAGTTTTGTACTCTCTTCCCTCCTCCTTCTCCTTGTGTGTCTCACTAGTCCTGCTTCTGTTTCTTCACTTCCTCTTTCTTTGAGAAAGCAAGCTTCTATCTTGGTTTCTCTGAAACAAGATTTTGAAGCTGCTAATGCTAACTCTTCTTTGAGAACCTGGAACATGTCTAACTACTTGTCCCTTTGCACTTGGTATGGCATTCAGTGTGACCATGATAACATGTCTGTGGTGTCACTTGACATATCCAATTTAAATGTTTCTGGGTCACTTTCACCTTCCATCACAGAACTCTTGAGTCTTGAGAGTGTGTCAATTCAGGGAAATAGCTTCTCTGGGGACTTCCCTGCTGATATTCACAAGCTAACAAGGCTGAGATTCCTCAACATTTCCAACAACATGTTCAGTGGAAAGTTGAGTTGGGAATTTTCTCAGTTGAAGGAACTTGAAGTGCTGGATGCTTATAACAATGATTTCAATGGCTCACTTCCTGAGGGTGTCACTGATCTACCAAGGCTCAAGCAGTTGAATTTTGGCGGGAATTACTTCTCTGGGACAATCCCTTCAAGGTATGGAAACATGGGGCAGCTCAACTTTCTGTCTCTTGCAGGAAATGATTTGAGTGGTTTCATACCAAGTGAGCTTGGAAATCTTACTAATCTGACTCATCTTTATTTGGGATACTACAATCAATTTGATGGTGGAATCCCATCTCAATTTGGTAAGTTGAACAATTTGGTTCATTTAGACCTTGCAAATTGTGGCTTGAAAGGTTCAATTCCACCTGAGTTGGGAAACCTTTACAAGTTAGACACTCTCTTCTTGCAAACTAATCAGCTCACAGGTTCAATCCCACCCCAGCTAGGAAACTTGAGTAGCTTGAAAGCTCTTGATCTATCATTCAACAAACTAACAGGAGACATCCCAAATGAGTTCTCAGGCCTTAAGGAGCTTATCCTCTTGAACTTATTTATCAACAGGTTTCATGGAGAAATTCCTCATTTCATTTCTGAGCTACCTAAATTGGAGGTGTTGAAGCTTTGGCAGAACAACTTCACTGGAGTAATTCCTTCAAAGCTTGGCCAGAATGGAAAATTGACTGAGCTTGACTTGTCAACAAATAAGCTCACTGGATTAGTGCCAAAATCTCTATGCCTTGGAAAGAGGCTTAAAATTTTGATCTTGCTAAAGAACTTTCTGTTTGGATCTTTGCCTGATGATCTTGGTCAATGCTACACACTCCAAAGAGTTCGTCTTGGTCAAAACTATTTGACTGGTCCACTACCACATGGATTTCTTTATTTGCCTGAGCTATCTCTTTTGGAACTACAGAACAATTATCTTAGTGGTGGACTTCCACAAGAAACAAGCAATGCACCCTCCAAACTTGGACAGTTGAATCTATCAAACAATCGTTTCTCAGGGTCTCTACCAACCTCAATTGGAAATTTTCCAAATTTACAGATTCTGCTGATTAGTGGAAATAGATTCTCTGGAGAAATCCCACCAGATATAGGGAGGTTGAAAAATATCCTCAAGTTGGATTTAAGTATGAACAACTTTTCAGGTACTATTCCTCCAGAGATAGGTAATTGTGCTTTACTCACATTTTTAGATTTGAGCCAAAACCAACTATTAGGCCCTATTCCAGTTCAAGTTGCTCAAATTCATATATTAAATTATCTTAATGTCTCATGGAACAACCTAAACCAAAGCCTTCCAAAGGAACTTGGGGCCATGAAGGGCTTAACTTCAGCAGATTTCTCTCACAATAACTTCTCTGGTTCAATACCTGAGGGGGGACAATTTTCAATATTTAATTCTACATCCTTTGTGGGTAACCCTCAGCTCTGTGGATATGACTTCAATCCATGCAACCTTTCTTCAACAGAGGTATTGGAATCTCAAGAAAAAAACAGTGCAAAACCAAGAGTTCCTGGGAAGTTTAAGTTCCTTTTTGCATTGGCATTGTTGGGATGCTCATTGGTTTTTGCAATCTTAGCCATCATCAAGAGTAGAAAGGCAAGGAGGCACTCCAATTCATGGAAGCTCACAGCATTTCAGAAGCTGGAATATGGAAGTGAAGACATCATAGGGTGTATAAAGGAAAGCAATGTCATAGGAAGAGGTGGAGCTGGGGTTGTGTATAGAGGAACCATGCCAAATGGAGAGGAAGTGGCTGTGAAGAAGCTATTAGGAATCAACAAAGGCTCTTCTCATGATAATGGCCTCTCTGCAGAAATAAGGACATTGGGTAGAATCAGGCACAGGTACATTGTAAGGTTGCTAGCATTTTGTTCAAATAGAGAGACCAATTTACTTGTTTATGATTACATGCCAAATGGAAGCTTGGGTGAAGTCTTGCATGGGAAGAGGGGTGAGTTTCTCAAGTGGGATACAAGGCTGAAAATAGCCATAGAAGCTGCAAAAGGACTTTGTTATTTGCATCATGATTGTTCCCCTTTGATAATCCATAGAGATGTCAAGTCAAACAACATATTATTGAACTCTGATTTTGAGGCTCATGTTGCTGATTTTGGACTTGCCAAGTTCATGCAAGATAATGGGGCATCAGAGTGCATGTCTTCCATTGCTGGTTCTTATGGCTATATAGCTCCAGAATATGCATACACATTGAAAGTTGATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTGCTGTTAGAACTGCTAACAGGGAGAAGACCAGTGGGGGATTTTGGGGAAGAGGGATTAGACATTGTTCAATGGACCAGGATGCAAACCAATTGGAACAAAGAGATGGTGATGAAGATACTTGATGAGAGGCTACGTCACATTCCTTTAGATGAAGCAAAGCAGGTGTTTTTTGTGGCCATGTTGTGTGTTCATGAACACAGCGTGGAGCGACCAACCATGAGGGAAGTGGTTGAAATGCTTGCACAAGCAAAACAACCAAACACATTTCAAATGCAGTGA | 2976 | 0.4059 | MATPLSFSFVLSSLLLLLVCLTSPASVSSLPLSLRKQASILVSLKQDFEAANANSSLRTWNMSNYLSLCTWYGIQCDHDNMSVVSLDISNLNVSGSLSPSITELLSLESVSIQGNSFSGDFPADIHKLTRLRFLNISNNMFSGKLSWEFSQLKELEVLDAYNNDFNGSLPEGVTDLPRLKQLNFGGNYFSGTIPSRYGNMGQLNFLSLAGNDLSGFIPSELGNLTNLTHLYLGYYNQFDGGIPSQFGKLNNLVHLDLANCGLKGSIPPELGNLYKLDTLFLQTNQLTGSIPPQLGNLSSLKALDLSFNKLTGDIPNEFSGLKELILLNLFINRFHGEIPHFISELPKLEVLKLWQNNFTGVIPSKLGQNGKLTELDLSTNKLTGLVPKSLCLGKRLKILILLKNFLFGSLPDDLGQCYTLQRVRLGQNYLTGPLPHGFLYLPELSLLELQNNYLSGGLPQETSNAPSKLGQLNLSNNRFSGSLPTSIGNFPNLQILLISGNRFSGEIPPDIGRLKNILKLDLSMNNFSGTIPPEIGNCALLTFLDLSQNQLLGPIPVQVAQIHILNYLNVSWNNLNQSLPKELGAMKGLTSADFSHNNFSGSIPEGGQFSIFNSTSFVGNPQLCGYDFNPCNLSSTEVLESQEKNSAKPRVPGKFKFLFALALLGCSLVFAILAIIKSRKARRHSNSWKLTAFQKLEYGSEDIIGCIKESNVIGRGGAGVVYRGTMPNGEEVAVKKLLGINKGSSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYDYMPNGSLGEVLHGKRGEFLKWDTRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKFMQDNGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGLDIVQWTRMQTNWNKEMVMKILDERLRHIPLDEAKQVFFVAMLCVHEHSVERPTMREVVEMLAQAKQPNTFQMQ. | 992 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03337 | 991 | Gene3D | Ribonuclease Inhibitor | 34 | 198 | IPR032675 | - | |
Seca5g03337 | 991 | SUPERFAMILY | Protein kinase-like (PK-like) | 701 | 979 | IPR011009 | - | |
Seca5g03337 | 991 | SMART | serkin_6 | 707 | 979 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03337 | 991 | Pfam | Leucine rich repeat N-terminal domain | 36 | 77 | IPR013210 | - | |
Seca5g03337 | 991 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 349 | 635 | - | - | |
Seca5g03337 | 991 | ProSiteProfiles | Leucine-rich repeat profile. | 371 | 392 | IPR001611 | GO:0005515 | |
Seca5g03337 | 991 | ProSiteProfiles | Protein kinase domain profile. | 707 | 987 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca5g03337 | 991 | SUPERFAMILY | L domain-like | 314 | 639 | - | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 562 | 586 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 490 | 514 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 200 | 224 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 249 | 273 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 441 | 465 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 128 | 151 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 370 | 392 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 152 | 176 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 345 | 369 | IPR003591 | - | |
Seca5g03337 | 991 | SMART | LRR_typ_2 | 297 | 320 | IPR003591 | - | |
Seca5g03337 | 991 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 | 676 | 784 | - | - | |
Seca5g03337 | 991 | Gene3D | Ribonuclease Inhibitor | 199 | 312 | IPR032675 | - | |
Seca5g03337 | 991 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 237 | 342 | - | - | |
Seca5g03337 | 991 | Gene3D | Phosphorylase Kinase; domain 1 | 677 | 784 | - | - | |
Seca5g03337 | 991 | SUPERFAMILY | L domain-like | 64 | 387 | - | - | |
Seca5g03337 | 991 | Pfam | Protein tyrosine and serine/threonine kinase | 709 | 979 | IPR001245 | GO:0004672|GO:0006468 | |
Seca5g03337 | 991 | Pfam | Leucine Rich Repeat | 130 | 152 | IPR001611 | GO:0005515 | |
Seca5g03337 | 991 | Pfam | Leucine rich repeat | 275 | 333 | IPR001611 | GO:0005515 | |
Seca5g03337 | 991 | Gene3D | Transferase(Phosphotransferase) domain 1 | 785 | 991 | - | - | |
Seca5g03337 | 991 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 36 | 148 | - | - | |
Seca5g03337 | 991 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 829 | 841 | IPR008271 | GO:0004672|GO:0006468 | |
Seca5g03337 | 991 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 785 | 991 | - | - | |
Seca5g03337 | 991 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 245 | 981 | - | - | |
Seca5g03337 | 991 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 | 149 | 236 | - | - | |
Seca5g03337 | 991 | Gene3D | Ribonuclease Inhibitor | 370 | 635 | IPR032675 | - | |
Seca5g03337 | 991 | Gene3D | Ribonuclease Inhibitor | 313 | 369 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03337 | Seca-Chr5 | 89595768 | 89600170 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03337 | 41 | 981 | Receptor kinase-like Gene Family | AT5G65700 | 58.140 | 0.0 | 1103 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Seca5g03337 | PK_Tyr_Ser-Thr | 9.3e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03337 | - | - | gmx:100815103 | 1688.7 |