Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03331 | ATGACACATTCAACACTACCTTCTCCTTCTTCCTTCACTTGTGATTGGACTTATGATGTCTTCCTCAGCTTCAGAGGTGTCGATACCCGCAACCATTTCACCGGTAATCTCTACAATTCTCTGGATCAAAGGGGCATCCACACTTTCCTCGATGATGAAGAGCTCAGGAAAGGAGAAGAAATCACACCAGCTCTTCACCAAGCCATTCAAAAATCTAGAATTTTCATTGCTGTTTTCTCTGAGAACTATGCATCCTCAACTCATTGTTTGGATGAACTTGTCACAATCCTTGATTGTTTGAAGGCACCAGGACGGTTGTTTAGACCAGTTTTCTATGATGTGGACCCATCCCAAGTTCGACACCAAACTGGGAGTTATGCAGAAGCTTTGGCAAAACATGAAGAGAGGTTCTATGATGACAAAGAAAAGGTGAAAAAATGGAGGGATGCTTTACGTCAAGCTGCTAATGTCTCTGGCTGGCATTTCCAACACGGGTCTCAATCTGAATATAAGTTTATTGGGAAGATTGTTGAAGAGGTATCTGAAAAGATCAATCGTACTCCTTTACATGTTGCTGATAACCCTGTTGCACTAGAGTCTCCTGTGCTAGAAATAGCATCTATCCTGCAACTTGGATCAGATGAGGGGGTTAACATGTTAGGCATTTATGGAATTGGTGGAATAGGTAAATCAACAATTGCTCGTGCTGTGTACAACTTGATTGCTGATCAATTTGAAGGTTTGTGTTTCCTTGCTGACATAAGAGAAAGGGCAATTAATCACCATGGTCTTTCACAACTCCAAGAAACACTGCTTTGTGAAATACTTGGGGAGAAAGATATCAGAGTGGGAGATGTTTACAGAGGGATTTCAATAATTAAAAAGAGGCTACACAGAAAGAAGGTCCTTTTGATTCTTGATAATGTTGACAAACCAAAGCAGTTACAGGTACTTGCTGGAGGACTTGATTGGTTTGGCCCTGGCAGCAAAATCATAATCACAACAAGAGACAATCATTTGCTAGCCACTCATGGGATTGAGAGGTTATATGAGGTTAAACAGTTAAATGATGAAAAAGCCCTTGAATTGTTTAGCTGGCATGCCTTCAAAAATAATAACATTGTTCCTCCAGCTTATGCTGATATTTCAAAACGTGCAGTTTGTTATGCTGGTGGCCTTCCATTGGCTTTGGAGGTGATAGGTTCTCACTTGTTTGGCAAAAGTTTAGATGTATGGAAATCTGCATTAGATAAATATGAGAGAGTTCTTCATAAGGAGATCCATGAAATACTTAAAGTTAGCTATGATGATTTGGAAGAAGAAGAGAAGGGTATTTTCCTTGACATCGCTTGTTTCTTCAATTCTTATGAAATGGACTATGTCAAAGAAATACTATACTTACATGGTTTTCATGCGGAAAATGGCATTCAAGTGTTAAGTAGCAAATCTCTGATAAAAATTGATGGCAATGGTTGTGTGAGAATGCATGACTTAATTCAAGACATGGGCAGAGAAATTGTAAGGCAGGAATCAACATTGGAGCCTGGCAAACGCAGTAGATTATGGTTTAATGATGACATTGTGCATGTTTTAGAAGAAAACACGGGAACTGATACAATTGAAGCTGTAATCATTGACTTGTACAATGACAAGGAAGTGCAGTGGAATGGGAAAGCATTCAAGAAGATGAAAAATCTGAGAATTCTCATAATTAGAAATGCTAGCTTTTCTAGAGGCCCTCAAAATCTGCCAAATAGTTTGAGAGTTCTAGACTGGAGTGGATATCCTTCACCATCTTTACCAGCTGATTTTAAACCCAAGAATCTTGTGATACTTAGCCTACCTGAAAGTTGCCTAAAATTGTTCAAATCACAAAAGGTGTTTGAGTCCATGAGCTTTATGGATTTTGAAAGCTGCAAATTCTTAACTGAACTACCTAGCTTGTCTGGACTACCAAATTTGGGAGCACTATGTCTTGATAATTGCTCTAATCTAATTAGGATTCATGGCTCAATTGGATCCCTTCATAGACTCATGCTATTGAGTGCTCAAGGATGTACCCAGCTTGAAATGTTGGTACCCTACATCAATTTACCATCTCTAGAGACTCTGGATCTGAGGGGTTGCTCAAGTCTTAAAAGCTTCCCAGAAGTATTAGGAGTGATGGAGAATATAAGAGATGTTTATTTAGACCAGACTGCCTTAGATAAATTGCCATTTTCAATTGGAAATCTTGTTGGGATCCAAAGGTTGTTCTTGAGGGAATGCCAAAGGCTGATTCAGCTACCAAGTAGTATCCATATATTGCCTAAACTTGAGATAATAATGGCTTATGATTCTAGGGGATTTCGGTTATTTGAGGATAAAGAAAAAGTGAGACCAGAAGTGTTTCCAAAAGTCATGCTTGTTTATACTGAAGGCAGGGGGATCTTACTTGATGTGTGTTCTCTTGACATATGCCCCAATAATGTCATAGAAGTATGTAGACCTCCATGGAATCCCCATGGACTTGAGGGTAGTGATTTTGGATTTGTGTTCAAAGGGATTCTAGAAGGGAGAGTAAATTGGTACAAGCTTGGAAGCAAGGAATCATCTCTGTGTTTTTGGTTCAGAAAGAAATTCCCCCAGATAGCTCTATGCTGTGCTGGAGAACCTGGCATATGTAAGAACATGGTGTTGGATTTCAAGTTCAGTGTACTCATCAATGGCACTAAGCAATTCAATTCTTCATGTAACTACATATTCTCTACAGAAAGAATGACAGACCAAATACTTATGTGTGATCTACAATGCAAAGTAGAGAGGGCATTTTCAGATCATGAATGGAATGAAGTAGAGATTTTATGTGAGTTGAAATATCCCATTCCATGTGGCTCTGAAAGAGAAATGGCCACACAGGATGGGACTGCAATGATTCCAAGTTGGTCCCTCATTTATGTGTATGAAGAAAACATGGAGGATATCAAATTTCTGCCTCTAAGCCAGGAATGTAAAGAAGCACAGAGAAGAAAGGAAACACTATTCGGCTTTCACTCTATGCTCAATAGTCATGGATTGAATTGGATTGGTTTTTGA | 3075 | 0.3912 | MTHSTLPSPSSFTCDWTYDVFLSFRGVDTRNHFTGNLYNSLDQRGIHTFLDDEELRKGEEITPALHQAIQKSRIFIAVFSENYASSTHCLDELVTILDCLKAPGRLFRPVFYDVDPSQVRHQTGSYAEALAKHEERFYDDKEKVKKWRDALRQAANVSGWHFQHGSQSEYKFIGKIVEEVSEKINRTPLHVADNPVALESPVLEIASILQLGSDEGVNMLGIYGIGGIGKSTIARAVYNLIADQFEGLCFLADIRERAINHHGLSQLQETLLCEILGEKDIRVGDVYRGISIIKKRLHRKKVLLILDNVDKPKQLQVLAGGLDWFGPGSKIIITTRDNHLLATHGIERLYEVKQLNDEKALELFSWHAFKNNNIVPPAYADISKRAVCYAGGLPLALEVIGSHLFGKSLDVWKSALDKYERVLHKEIHEILKVSYDDLEEEEKGIFLDIACFFNSYEMDYVKEILYLHGFHAENGIQVLSSKSLIKIDGNGCVRMHDLIQDMGREIVRQESTLEPGKRSRLWFNDDIVHVLEENTGTDTIEAVIIDLYNDKEVQWNGKAFKKMKNLRILIIRNASFSRGPQNLPNSLRVLDWSGYPSPSLPADFKPKNLVILSLPESCLKLFKSQKVFESMSFMDFESCKFLTELPSLSGLPNLGALCLDNCSNLIRIHGSIGSLHRLMLLSAQGCTQLEMLVPYINLPSLETLDLRGCSSLKSFPEVLGVMENIRDVYLDQTALDKLPFSIGNLVGIQRLFLRECQRLIQLPSSIHILPKLEIIMAYDSRGFRLFEDKEKVRPEVFPKVMLVYTEGRGILLDVCSLDICPNNVIEVCRPPWNPHGLEGSDFGFVFKGILEGRVNWYKLGSKESSLCFWFRKKFPQIALCCAGEPGICKNMVLDFKFSVLINGTKQFNSSCNYIFSTERMTDQILMCDLQCKVERAFSDHEWNEVEILCELKYPIPCGSEREMATQDGTAMIPSWSLIYVYEENMEDIKFLPLSQECKEAQRRKETLFGFHSMLNSHGLNWIGF. | 1025 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03331 | 1024 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 14 | 186 | - | - | |
Seca5g03331 | 1024 | SMART | till_3 | 17 | 157 | IPR000157 | GO:0007165 | |
Seca5g03331 | 1024 | Gene3D | - | 183 | 347 | IPR027417 | - | |
Seca5g03331 | 1024 | SUPERFAMILY | L domain-like | 542 | 782 | - | - | |
Seca5g03331 | 1024 | Gene3D | Ribonuclease Inhibitor | 531 | 694 | IPR032675 | - | |
Seca5g03331 | 1024 | Gene3D | Ribonuclease Inhibitor | 695 | 782 | IPR032675 | - | |
Seca5g03331 | 1024 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 18 | 775 | IPR044974 | GO:0006952 | |
Seca5g03331 | 1024 | Pfam | NB-ARC domain | 204 | 436 | IPR002182 | GO:0043531 | |
Seca5g03331 | 1024 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 8 | 160 | IPR035897 | - | |
Seca5g03331 | 1024 | SUPERFAMILY | "Winged helix" DNA-binding domain | 425 | 532 | IPR036390 | - | |
Seca5g03331 | 1024 | Gene3D | - | 12 | 182 | IPR035897 | - | |
Seca5g03331 | 1024 | Gene3D | - | 354 | 439 | IPR042197 | - | |
Seca5g03331 | 1024 | Pfam | TIR domain | 18 | 188 | IPR000157 | GO:0007165 | |
Seca5g03331 | 1024 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 183 | 449 | IPR027417 | - | |
Seca5g03331 | 1024 | PRINTS | Disease resistance protein signature | 390 | 404 | - | - | |
Seca5g03331 | 1024 | PRINTS | Disease resistance protein signature | 296 | 310 | - | - | |
Seca5g03331 | 1024 | PRINTS | Disease resistance protein signature | 219 | 234 | - | - | |
Seca5g03331 | 1024 | PRINTS | Disease resistance protein signature | 696 | 712 | - | - | |
Seca5g03331 | 1024 | ProSiteProfiles | TIR domain profile. | 16 | 184 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03331 | Seca-Chr5 | 89557992 | 89561851 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca5g03331 | 7 | 791 | WRKY Transcription Factor Family | AT4G12020 | 34.198 | 2.76e-105 | 360 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03331 | - | - | mtr:11441658 | 1458.74 |