Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03224 ATGGTAACAATTACAGCCTCTTACACTATCATTCCAAATGAATCGACTCCACAAGGTCGTTTATGGCTGTCCGATATAGACCAAGTCATTCGTATGCGCCACACACCCACCATTTACATTTACAAAGCAAAACACAACCCTGATTTCATAGAGAGGTTGAGGAACTCTCTTAGCAAGATTCTAGTGCACTATTATCCCATAGCTGGTCGAGTGTGTTGGACAGAAGGTGGTCGAATAGAATTTGATTGCAATGCAAAAGGAGCAATATTGCTTGAAGCTGAAACCACAAAAACATTGGGTGATTATGGAGACTTTTCACCCTCTGAGTCCACCAAAGAGCTTGTTCCAACAATCGATTACAATCAACCTATGGAGGACCTTCCTTTATTAACAGTGCAACTCACAAGATTTCATGGCAATGAAGGCCTTGCAATTGGAGTTGCTTTCTTCCATCCTTTGTCTGATGGACTTGGAGCCATTCAATTCATCAACTCATGGGCAAAGATAGCTCGAGGAGACACATTAGAGCCCCATGAAATGCCCTTTCTTGATCGAACAATACTCAAATTTTCACACCCCCTTTTGGCCCCACGCTTTGACCATATAGAGTTGAAGCCTCTGCCACTCATTCTAGGAAGATCTGACACCACTGTTGAAAAAAATAAGAAGGTAACCACTGCATTGTTAAGACTCACAGCAGAGCAAGTGGAAAAGCTCAAAAATAAGGCCAATGAAGAAGCCCCAAAACAAGGGTCTAGACCTTATAGCAAATATGAAGCTATTGGGGCACATATATGGAGATGTGCATCCAAGGCTCGTGAGCTTGATGAGAATCAACCAATTGTTGTTCGGTTCAATGCTGATATTCGCAGTAGAATTGTCCCACCTCTCCCTCAGAATTATTTTGGGAATGCTCTGACACAAACAGCAGCAAGTGGTCATGTTGGAGAAATCACATCAAAACCATTGAGTTATGTTGCACAAAAGATAAGGGAAGCAATAAAAGTGGTGAAAAATGAGTACATAAGGTCTCAACTTGATGTTATTAGAGGACATGACCATTTGGATAATGCAAGGGCTTTATTCTTAGGACAAGAAGGCAAGAATGCCTCATTTTTTGGCAATCCTAATTTTCATCTTACAAGTTGGATGAGCATGCCGGTGTATGAAGCAGATTTTGGGTGGGGAAAGCCTCACTACTTTGGCTTAGCATATGTTGCCCCACATGACAGGGCCTTAATTCTTCTTAGCCCAGAAGGGGATGGCTCTGTTATTGTGTGTCTGCACTTTCAGGAAGCACATATTCAACTTTTCAAGGATTTCTTCTACCGCGATATATGA 1341 0.4191 MVTITASYTIIPNESTPQGRLWLSDIDQVIRMRHTPTIYIYKAKHNPDFIERLRNSLSKILVHYYPIAGRVCWTEGGRIEFDCNAKGAILLEAETTKTLGDYGDFSPSESTKELVPTIDYNQPMEDLPLLTVQLTRFHGNEGLAIGVAFFHPLSDGLGAIQFINSWAKIARGDTLEPHEMPFLDRTILKFSHPLLAPRFDHIELKPLPLILGRSDTTVEKNKKVTTALLRLTAEQVEKLKNKANEEAPKQGSRPYSKYEAIGAHIWRCASKARELDENQPIVVRFNADIRSRIVPPLPQNYFGNALTQTAASGHVGEITSKPLSYVAQKIREAIKVVKNEYIRSQLDVIRGHDHLDNARALFLGQEGKNASFFGNPNFHLTSWMSMPVYEADFGWGKPHYFGLAYVAPHDRALILLSPEGDGSVIVCLHFQEAHIQLFKDFFYRDI. 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03224 446 Pfam Transferase family 1 443 - -
Seca5g03224 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 439 - -
Seca5g03224 446 Gene3D - 1 206 IPR023213 -
Seca5g03224 446 Gene3D - 212 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03224 Seca-Chr5 87874645 87875985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03224 2 443 Monolignol Biosynthesis Gene Families AT5G48930 34.685 1.57e-92 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03224 K13065 - gmx:100778626 655.595