Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03218 ATGATTTTCTCGTTGAGACAACCTGGTATAGGGATCACCGGCTCTGGTGTTGTTCTGAGGAACAGACATGCAACCCCAGTTCAACCACGGTCGTTTTTACCTTCTCTGTCAAGAGAAAAAGTTCAGAAACCCCTTGTTTCAGTGCAAAAGCCTCTGCACCTTGCATCTCTTGGTGTTGGAAATTTTGGGTCGGTGAGGACTTTTGAGTCAGAGAAGAATCCTAGGAGGGATGATTTGGTGAAGTGTGGAGCGTATGAGGCAGATAGATCAGAGATTGAAGCTGCAGCCACGCCAACAGAGGCTGTCAATAAGGTGAAAATTGGGATATATTTTGCAACCTGGTGGGCTCTGAATGTGGTGTTCAATATTTATAACAAGAAGGTTTTGAATGCCTACCCGTACCCTTGGCTCACTTCAACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACCAGGATAGCAGAGGCGCCTAAGACTGATCTTGAGTTTTGGAAGTCTTTGTTCCCTGTTGCTGTGGCACATACAATAGGACATGTTGCTGCAACGGTTAGTATGTCTAAAGTTGCAGTATCATTTACCCATATTATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTGTCAAGATTTCTCTTGGGTGAGACCTTCCCTGTGCCAGTCTATCTGTCTTTAATTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGACTGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCCGTAATATTTTTTCGAAAAAGGGGATGAAGGGAAAGTCTGTCAGTGGAATGAATTACTATGCTTGTCTATCTATTTTGTCCCTTGCACTTCTCACACCCTTTGCAATTGCTGTGGAAGGGCCACAGATGTGGGCTGCTGGATGGCAAACAGCCATCTCTCAAATTGGACCCCAATTCATATGGTGGGTAGCAGCTCAGAGTATATTCTATCATCTATACAATCAGGTGTCATACATGTCTCTGGATGAGATCTCTCCCTTGACCTTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTGTCTTCAATTATTATCTTCCACACGCCAGTTCAGCCCGTCAATGCTCTTGGAGCTGCTATTGCTGTCCTTGGGACCTTCTTATATTCACAGGCAAAACAATAG 1197 0.4411 MIFSLRQPGIGITGSGVVLRNRHATPVQPRSFLPSLSREKVQKPLVSVQKPLHLASLGVGNFGSVRTFESEKNPRRDDLVKCGAYEADRSEIEAAATPTEAVNKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQTAISQIGPQFIWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAVLGTFLYSQAKQ. 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03218 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Seca5g03218 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca5g03218 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Seca5g03218 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03218 Seca-Chr5 87751018 87755411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03218 22 398 Antiporters AT1G61800 74.740 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03218 K15283 - gmx:100801832 684.1