Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca5g03119 | ATGAAGCACTACGATGAATTTGTAGAAGAAATGACTGAGATAGAAGCTGCAGTAGCTCCTTTCTGCATGGATGATGGATGCAAAAAGAGTCCTCCAACTGCCCATGGTTCTGATCAGGAGAGGAAGAAAGTGGTTCGATGGACAAAAAAGGAGCATGGACGCTTTCTGATGGGACTTAAGAACTATGGCAAAGGGCATTGGAAAAATATCGCTCGCTATTCTGTATTCACAAAGACTTCTACCCAAGTGGCAATCCATGCTCAAAAGTACTTCAAAAGGCAAAAGCTTTCTCGAGGGAAAGATAATAAAAGGAGGTCTAGTATCCATGATATCACCACTGATAATCTTACAAAGCCTACAACTAATTCAGGTCAAGACAAGCCTATTTCGTTCAATGAGTCTCTCATGCCAATTGTGCAACCAGAAGAGATTAATCACCTCAATGAGGAGCCACTCATGGAGGTTTTCAATCCAAATTATGAGTCTCTCATGACAAATGTGCAACCAGAAGGGATTAATCACCACAATGTGGAGCCACTCATGGAGGTTATCAATCCAAATTATGATGAAATGTTCATGTTCCCCTCATATGATATCTATTCTGAGACCCTCAAGTTTCAAGGTCAATAG | 630 | 0.4095 | MKHYDEFVEEMTEIEAAVAPFCMDDGCKKSPPTAHGSDQERKKVVRWTKKEHGRFLMGLKNYGKGHWKNIARYSVFTKTSTQVAIHAQKYFKRQKLSRGKDNKRRSSIHDITTDNLTKPTTNSGQDKPISFNESLMPIVQPEEINHLNEEPLMEVFNPNYESLMTNVQPEGINHHNVEPLMEVINPNYDEMFMFPSYDIYSETLKFQGQ. | 210 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca5g03119 | 209 | SUPERFAMILY | Homeodomain-like | 41 | 95 | IPR009057 | - | |
Seca5g03119 | 209 | MobiDBLite | consensus disorder prediction | 112 | 130 | - | - | |
Seca5g03119 | 209 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 42 | 94 | IPR006447 | GO:0003677 | |
Seca5g03119 | 209 | Pfam | Myb-like DNA-binding domain | 46 | 91 | IPR001005 | - | |
Seca5g03119 | 209 | CDD | SANT | 46 | 91 | IPR001005 | - | |
Seca5g03119 | 209 | ProSiteProfiles | Myb-like domain profile. | 39 | 91 | IPR001005 | - | |
Seca5g03119 | 209 | Gene3D | - | 45 | 96 | - | - | |
Seca5g03119 | 209 | MobiDBLite | consensus disorder prediction | 95 | 130 | - | - | |
Seca5g03119 | 209 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 39 | 95 | IPR017930 | - | |
Seca5g03119 | 209 | PANTHER | DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED | 1 | 155 | IPR043363 | - | |
Seca5g03119 | 209 | SMART | sant | 43 | 93 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca5g03119 | Seca-Chr5 | 86220893 | 86221793 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Seca5g03119 | Myb_DNA-binding | 1.1e-07 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca5g03119 | - | - | gmx:100783469 | 174.096 |