Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03108 ATGAGAGAACTGAAGTTATTGAAAAACCAGTGGAGGAGTGGTGTGCATGTGCAAAATCTCCTTAAAGAGGTGGCAGATCTGGAGCAAAGGATGGGGGCAAACAACAATTGCTTTCAAATATGGTGTCCAACCTGGAGAAGATATTCTTTATGCAAGCAAATGGTGGAAAAGATAGAAGAAATGAGGAAATTTAAAGGCAAAAGCAATATTCAACCATTTTCTCACCTTGCTCCACTTCCAGGCATTCAGTACAGGTCATCTGAAAAGTTTATTTTTTTCGAATCAACAAAAGTGGCTTACAATGAACTCTTGGAGGCACTCAAGGATGATAGCATCTATATGATAGGAGTGCATGGAATGGGAGGATCTGGGAAAACAAGTCTTGTAACAGAACTTGGTAAGAAGGCTGAACAGTTGAGTTTGTTTGATAAGGTTATATTAATCACAGTGTCTCAAACCCCAAATATTAGAAGCATTCAAGGAAAAATAGCAGATATGTTAAACTTGAGGCTAGAGGAAGAAACTGAAGAGGGAAGAGCACAACGTCTATGGGAGAGTTTGAAAGAAAAGAAGCGAATTCTTGTCATAGTAGATGATTTATGGAGGGAATTTAATTTGGAGGATATTGGGATTTGCTTACACAAAGTTAACAAGGGTGCGTGGAAGATCCTTGTAACCACTCGTAATCAAGGTGTATGTACTTCAATGGACTGTCAGAAGAAGATTCATTTGGGGCTCTTATCTGAAGATGAGTCTTGGTCCTTGTTCCAAAAGTGTGCAAACATTGATGATGAATTCTCTAATTCATTGAATGGTGTGCCACAAAAAATTTGCAATGAATGCAAAGGACTACCTATAGCAATAGTAACTATGGGATCTTCCTTAAAGGGAAGAAGTAAAGATGAGTGGGAGGTGGCATTAGCCAACTTGAGGGATTCAGAGGTATTTAATGATCATGAAGAAGGAGTGAGAGCTGCTATAAGTTGTCTCAAATTAAGCTATGATTATTTAGAGAGCAATGAAGTAAAGCAGCTATTTTTGATGTGTTCTATGTTTCCAGAAGACTATGAAATCTCAATAGAAGATTTGATCCGATGTGCAATTGGACTTGGTTTGGGAGGAAGATCTTCATTGAAGTCAACAAGGAGCTGGATCAAAGCAGGCATAAACAAACTTTTAGATTCTTATTTGTTAATGCATAGTAATGAAAGTGAAAAATATGTGAAGATACATGATTTGGCTGCGAGGCTGCCTTATGGATAG 1263 0.38 MRELKLLKNQWRSGVHVQNLLKEVADLEQRMGANNNCFQIWCPTWRRYSLCKQMVEKIEEMRKFKGKSNIQPFSHLAPLPGIQYRSSEKFIFFESTKVAYNELLEALKDDSIYMIGVHGMGGSGKTSLVTELGKKAEQLSLFDKVILITVSQTPNIRSIQGKIADMLNLRLEEETEEGRAQRLWESLKEKKRILVIVDDLWREFNLEDIGICLHKVNKGAWKILVTTRNQGVCTSMDCQKKIHLGLLSEDESWSLFQKCANIDDEFSNSLNGVPQKICNECKGLPIAIVTMGSSLKGRSKDEWEVALANLRDSEVFNDHEEGVRAAISCLKLSYDYLESNEVKQLFLMCSMFPEDYEISIEDLIRCAIGLGLGGRSSLKSTRSWIKAGINKLLDSYLLMHSNESEKYVKIHDLAARLPYG. 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03108 420 FunFam Probable disease resistance protein At1g61300 84 241 - -
Seca5g03108 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 349 IPR027417 -
Seca5g03108 420 PRINTS Disease resistance protein signature 187 201 - -
Seca5g03108 420 PRINTS Disease resistance protein signature 281 295 - -
Seca5g03108 420 PRINTS Disease resistance protein signature 114 129 - -
Seca5g03108 420 Gene3D - 246 338 IPR042197 -
Seca5g03108 420 Pfam NB-ARC domain 102 335 IPR002182 GO:0043531
Seca5g03108 420 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 14 413 - -
Seca5g03108 420 Gene3D - 83 243 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03108 Seca-Chr5 86160006 86161268 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03108 112 353 WRKY Transcription Factor Family AT5G45050 25.660 7.02e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03108 - - aprc:113855292 530.02