Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03106 ATGGGTTTCTTGGTAACGACGCTAATCTTCGTGGTGATTGGGATCATCGCGTGCCTCTGCACCAGAATTTGCTGCAATAGAGGACCTTCTACCAATCTATTTCACCTAACTTTGGTTATTACTGCAACAATATGTTGTTGGATGATGTGGGCAATTGTATATCTAGCGCAGATGAAACCACTCATAGTACCTATACTGAACGAGGGTGAATAA 213 0.4225 MGFLVTTLIFVVIGIIACLCTRICCNRGPSTNLFHLTLVITATICCWMMWAIVYLAQMKPLIVPILNEGE. 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03106 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Seca5g03106 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 69 IPR008389 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03106 Seca-Chr5 86117493 86124985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03106 1 70 Primary Pumps ATPases(2) AT5G55290 85.714 2.48e-40 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03106 K02153 - gmx:100781475 149.828