Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03052 ATGGAGCTTCATGTTCTAATAATCCTTGGTTTCCTCTTGTTCATGTTATTCAACATTATTTGGAGATCAAAAACTAAGAATGCAAACTCCAAATTTCCACCAGGACCAAGAAAACTACCTCTCATAGGGAACATGCACAAACTTGGAGCCCTGCCCCATTGTTCCCTAGCAAAATTGGCTCAGCAATATGGCCCTTTGATGCATATGCAGCTTGGTGAACTTTCTTGCATAGTGGTATCTTCCCCAGAAATGGCTAAAGAAGTGATGAAAACACATGACATCAACTTTGCAAATAGGCCTCCTCTGCTTGCTGCTGAAGTAATAACTTATGGTTCTAAAGGGATGAGCTTTTCTCCACATGGAACCTATTGGAGGCAGATGAGAAAGATTTGTACTATGGAGCTTTTATCAGCAAAACGTGTTGAGTCCTTCAGATCACTTAGGGAGGAAGAATTGTCAAATCTTGTCAAAGATATAATTTTGAGTGAAGGGTCACCTGTTAATCTCAGTGAGAAGATTGATTCATTGGCATATGGTTTAACATCAAGGGCTGCTTTTGGTCCACAAGCTGAAGGTAAAGAAGAGTATAGAAAACTTATGAAGGATGTTTCAAAGATGGCTGGAGGGTTCTCTGTTGCTGATTTGTATCCTTCTATTGGAATTCTTCAAGTTCTATCAGGATTTAGGCATAAACTTGAGGTGCTTCATTGTGAAATGGATAGGATACTGGAGAACATTGTGAGAGGTCATAGAGACAAGAATTTGGAAACAAAGGCAACTCAAGAAACAGGGGAAGATCTAGTTGATGTTCTTTTGAAGCTGCAAAAGCATAGTGATCTTGAACATCCCTTAACAGACACCATAGTCAAAGCAACAATTTTGGACATCTTCAGTGCTGGAAGTGACACCACATTCACAATTCTAGAGTGGGCAATGTCAGAATTGATTAAAAACCCACATGTGATGGAGAAAGCACAAGCTGAAGTAAGAAGGGTCTATAATGAAAAAGGATATGTGGATGAACCAAGTCTTCATGAGCTGAAATACTTGAGATCAGTTATCAGAGAAACATTGCGTCTACATGCTCCTGTTCCATTGTTACTTCCAAGGGAATGCAGTGAAAGATGTGAAATTAATGGTTATGAGATACCTGCTAAGAGCAAGATCATAGTTAATGGATGGTCCATATGCAGAGATCCCAACTATTGGATTGAAGCTGAGAAATTTAATCCAGAAAGGTTCCTTGATAGCTCAGTTGATTACAAAGGTGTAGATTTTCAGTTTATCCCATTTGGTGCTGGAAGGAGGATTTGTCCAGGCATGGCATTTGGTATTGCTAATATTGAAATCTCACTTGCAAACTTGCTTTTCCATTTTGATTGGAAGATGCCTGGTGGAAATAAGCCTAAAGAACTTGACATGTCTGAATCCTTTGGCTTGACTGTTAGAAGGAAACATGACTTGTGCAAATTCATGGAGTTGGATCTGCAGATATCCTTCTTCCTCTTTTTATTCATAGTGTTTAGCATAATTTGGAGATCAAAATCCAACCTTTCAAACTCCAAGTTACCACCAGGACCACCAACACTGCCTCTTATAGGAAACATGCACCAGCTTGGTGCAATGTCTCATCATGGCCTAGCAAAATTAGCACAGAGATATGGGCCTCTTATGCATGTAAAATGCGGTGGTGTTTCCATCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTAATGAAGACACATGACATCAATTTTTCAAATAGGCCTCATCTTCTTGCTGCAGATATTATAACTTATGGTTCTACAGGCATGTCTTTTTCATCTTATGGAAGTTATTGGAGGCAGATGAGAAAGATTTCCACTTTTGAACTACTAACCCCAAAGCGTGTTGAATCATTTCAATCAATTAGAGAACAGGAAGCATCAAATCTTGTCAAAGAGATAGGTCTGAGTGAAGGGTCATCTATCAATCTCAGTAAGATGATCAACTCATTGGTCTATGGCTTAATATCAAGAGTAGCCTTAGGGGGAAAATCCGAAGATCAAGAAGCATTCATAACTGTTATGAAGGATGTCATAAAAATTATTGCTAGTTTTTCTATAGCTGATATGTTTCCTTCCATTGAAGTGCTTCAAGTTTTGACAGGTATAAAGTCCAAAGCTGAGAAGCTCCATCAAGAAATAGATAGGATCCTTGAGAAAATTGTCAAAGATCACAGGGAGGGAAGTTCAGAAACAAAGACAATCAATGAAAAAGCTGGTGAAGACCTAGTTGATGTCTTACTAAGGCTTCAAAAGCAGAACAACCTTGATCATCCTATAACTGACAGCAATATCAAAGCAAACATGTTGGTTAGTATTTTTGCAATTAGAAATGATGTAATTTCTAAAAGTAATTCCAAATGCCTCATTTTGATCACCCTAAAGAGTCGGAATCGATCATATTAA 2454 0.3855 MELHVLIILGFLLFMLFNIIWRSKTKNANSKFPPGPRKLPLIGNMHKLGALPHCSLAKLAQQYGPLMHMQLGELSCIVVSSPEMAKEVMKTHDINFANRPPLLAAEVITYGSKGMSFSPHGTYWRQMRKICTMELLSAKRVESFRSLREEELSNLVKDIILSEGSPVNLSEKIDSLAYGLTSRAAFGPQAEGKEEYRKLMKDVSKMAGGFSVADLYPSIGILQVLSGFRHKLEVLHCEMDRILENIVRGHRDKNLETKATQETGEDLVDVLLKLQKHSDLEHPLTDTIVKATILDIFSAGSDTTFTILEWAMSELIKNPHVMEKAQAEVRRVYNEKGYVDEPSLHELKYLRSVIRETLRLHAPVPLLLPRECSERCEINGYEIPAKSKIIVNGWSICRDPNYWIEAEKFNPERFLDSSVDYKGVDFQFIPFGAGRRICPGMAFGIANIEISLANLLFHFDWKMPGGNKPKELDMSESFGLTVRRKHDLCKFMELDLQISFFLFLFIVFSIIWRSKSNLSNSKLPPGPPTLPLIGNMHQLGAMSHHGLAKLAQRYGPLMHVKCGGVSIIVVSSPEMAKEVMKTHDINFSNRPHLLAADIITYGSTGMSFSSYGSYWRQMRKISTFELLTPKRVESFQSIREQEASNLVKEIGLSEGSSINLSKMINSLVYGLISRVALGGKSEDQEAFITVMKDVIKIIASFSIADMFPSIEVLQVLTGIKSKAEKLHQEIDRILEKIVKDHREGSSETKTINEKAGEDLVDVLLRLQKQNNLDHPITDSNIKANMLVSIFAIRNDVISKSNSKCLILITLKSRNRSY. 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03052 817 CDD CYP71-like 62 488 - -
Seca5g03052 817 FunFam Cytochrome P450 71D8 25 491 - -
Seca5g03052 817 Coils Coil 716 736 - -
Seca5g03052 817 PANTHER CYTOCHROME P450 71B11-RELATED 16 490 - -
Seca5g03052 817 SUPERFAMILY Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Seca5g03052 817 Pfam Cytochrome P450 33 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 Pfam Cytochrome P450 524 791 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 Gene3D Cytochrome P450 25 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 Gene3D Cytochrome P450 517 798 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03052 817 SUPERFAMILY Cytochrome P450 522 791 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03052 Seca-Chr5 85435258 85438911 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03052 496 768 Cytochrome P450 AT5G25120 35.000 1.26e-50 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03052 - - pvy:116136695 831.247