Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03051 ATGGGTCTTCAAGCTATTTACCTCTTGGTCCTTCTTTCCATTTCCCTTTTCATCATTGTGAGACTAATAATTAGAAGCAATCCCAAGAAAACTGACTCAATTCCAAATTTCCCACCAGGGCCAAGGAAGCTACCGATTGTTGGAAATATACCCCATGTTGTTGGCTCTCCACCACATAGAAAATTAAGAGAATTAGCAAAAAAATATGGACCCTTGATGCATCTTCAACTTGGTGAAGTCTTCTTCATTGTTGTTTCCTCAGCAGAGTATGCTAGGGAGGTAATGAAAAACCATGATGTTATATTTGCATCAAGGCCTCGTACACTAACCTCACAGATAATGTTCTATGATTCCACAGATATAGCCTTTTCACCTTATGGTGATTATTGGAGACAGCTTAGGAAGATTTGCACTATAGAGCTTTTAAGTGCAAAACGTGTTCAATCTCATTGGCCAATCAGAGAGGAAGAGATGGCTAATCTCATCAAACACATTGCTTCAGAAGAAGGATCAATCATCAATCTTTCTCAAGCAGTTATATCACTGATGTACTCAATCACCTCAAGGGCTGCCTTTGGCAAGAAATACATGGAGCAAGAAGAGTTCATATCAGTGGTAAGAGAATTTTTAAGGCTAGCTGGAGGTTTCTACATTGGAGACTTGTTTCCTTCAGCTAAATTCCTTCAAAACCTCTCTGGGAGGAGGCCTAAGCTTGAGAAGTTACACCAAAAAGTAGACAGGATATTGGAGAATATCATCAATGACCATAAAGAGGCCAAGTCAAGAACCAAAGAAGGTCTAATTGAAGGAGAGGAAGATCTGATTGATGTTCTCTTAAAATTTGAGGATAGTGGCAGTGACCTGGATTTTTGCTTATCTAAAAGAAATATCAAGGCTATAATCTTTGATGTCTTCACTGGTGGAAGTGACAGTGCAGCAACTACCATTAACTGGGCAATGGCTGAGATGATGAAGGATCCAAGAGTATTGAAGAAAGCACAAGCTGAAGTGAGAGTGATATTTGAAAGGAGAGGAAAGGTTGATAAAACTTGCATTGATGAGCTCAAATACTTGAGAGCAGTCATCAAAGAGGTCCTGAGATTACACCCTCCAGCTCCTCTTTTGATTCCAAGGGAGTGTGGAAAAGCTTGTGAGATTAATGGTTATCACATACCTGTCCAAACCAGGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCCAAATATTGGATTGAACCAGAGAGGTTTTATCCAGAGAGGTTTATTGATAGCTCTGTTGACTACAAAGGAACTAGTTTTGAGTACATCCCATTTGGTGCTGGAAGGAGAATTTGCCCAGGCATGAACTATGGTATTGCAAATGTTGAGTTGGTCCTTGCATCATTGTTGTATCACTTTGATTGGAGACTTCCCAAAGGAATGAAAAGTGAGGATTTGGACATGACTGAGCTATTTGGAGCATCAGTTATAAGAAAAGGTTCTGTTTCCACCATGGATCATCAAATCCTCTACTTTACATCCATTTTCTCCCTTGTCATTTTTGTGTTTATGGCACTCAAAATAGTGACCAAGAAATCTGACTCAGCTCCAAATTTACCACCAGGACCATGGAAGCTACCTATCATAGGGAATATACACAACCTTGTAGGCTCACTTCCCCATCGTCAATTAAGAGATTTATCAGCAAAATATGGACCCTTGATGCACCTGAAGCTTGGAGAGGTTTCAACCATTGTGGTTTCATCCCCTGAGTATGCAAGAGAGGTGTTGAAAACCCATGATCTTGTCTTTGCATCTAGGCCTCCTATCCTTGCTTCAAAGATACTCACTTATGATTCTCTTGGTATGTCTTTTGCACCTTATGGTGATTATTGGAGACAGCTTAGGAAGATTTGTACATTGGAGCTATTAAGCTCAAAACGTGTCCAATCTTTCCAACCAATCAGAGGGGAAGAGCTAACTAATCTAATCAAATTGATTGCTTCAAAAGAAGGATCACCCATCAATCTCACCAAAGAAGTGATTTCAACAATATCTACAATCACTTCAAGGTCAGCCTTTGGGAAGAAGTGCAAGGACCATAAGAAGTTCATATCAGTAGTAAAGGAAGCCACAGAAGTTGCTGGGGGTTTTGATTTGGGAGATTTGTACCCTTCTGCTAAATGGCTTCAACACATCTCTGGGTTGAAGCCTAAGCTTGAAAAGTTGCACCAACAAGCTGACCAGATAATGCAAAACATCATCAATGAGCATAGGGAGGATAAGTCAAAGGTCACTGAAGACCAAGGTGAAGAAGTGGGAGAAGATCTTGTAGATGTGCTCTTGAGGCAGGAGTTTGGCTTAAGTGATAATAGTGTCAAGGCTGTGATCATGGATATCTTTGGAGGTGGAAGTGAGACATCATCTACTACCATAACATGGGCAATGGCAGAGATGATTAAAAATCCAAGAGTAATGGAGAAGGTACAAGCTGAGGTAAGGGAGGCATTTGATAAAGAAGGAAAACCAAATGAGATTGGCATAGAGAAACTAAAATATTTGAAATCTGTTGTGAAAGAGACATTGAGATTACACCCTCCTGGTGCTTTTTTGCTTCCAAGAGAGTGTGGACAAGCTTGTGAGATCAATGGGTATCATATACCTCTAAAAAGCAAGGTCATAGTCAATGCTTGGGCAATTGGAAGAGATCCAAATCATTGGACTGAGGCAGAGAGGTTTTATCCTGAAAGGTTCATTGAAAGTTCTGTGGACTATAAAGGCAATAATTTTGAGTTCATCCCATTTGGTGCTGGAAGAAGAATATGCCCGGGACTCTCATTTGGCTTGATCAACGTTGAGTTTCCACTAGCATTGTTGATGTACCATTTTGATTGGAAACTTCCCAATGGAATCAAGAATGAAGATTTGGATATGACTGAGACATTTGGAGTAGCAGTTACTAGAAAAGATGATTTATACCTGATTCCCATCACATATCTCTTATCCTTCTTCCTCTTCTTGTTCATAGTGTTTAGCATAGTTTGGAGATCAAAATCCAACCCTTCAAACTCCAAGTTGCCACCAGGACCACCAAAATTGCCTTTTATAGGGAACATCCACCAGCTTGGTGCAATGCCTCATCATGGTCTAGCAAAATTAGCACAGAAATATGGACCTCTGATGCATATAAAACTTGGTGGACTTTCAGCCATAGTGGTGTCTTCCCCTGAAATGGCCAAAGAAGTAATGAAGACACATGACATCAATTTTTCAAATAGGCCTCATCTTCTTGCTGCAGATATTATAACTTATGGTTCTAAAGGCATGAGCTTTTCCTCTTATGGAAGTTATTGGAGGCAGATGAGAAAGATTTCCACTTTTGAACTACTAACCCCAAAGCGTGTTGAATCCTTTCAATCAATTAGAGAACAGGAAGCATCAAATCTTGTCAAAGAGATAGGCTTCAGTGAAGGGTCATCTATCAATCTCAGTAAGATGATCAATTCATTCTCTTATGGCTTAACATCAAGAGTAGCCTTAGGGGGAAAATCCAAAGATCAAGAAGCATTCATAGCTATTATGAAGGATGTCTTAAAAATAGTTTCTGGTTTTTCTATAGCTGACCTGTTTCCTTCAATTGAAGTGCTTCAAGTTTTGACAGGAATAAGGTCCAACGCTGAGAAGCTCCATCAAGAGATAGATAGGATCCTTGAGAAAATTGTCAATGATCATAAGGAGGAAAATTCAGAAACAAGGGAAATCAATGAAAAAGCAGGTGAAGACCTAGTTGATGTCTTACTAAGGCTTCAGAAGCAGAACAACCTTGAGCATCCTCTATCTGACAGTGTTATCAAAGCAAACATGTTGGTTAGTATTTTGCAATTAGAAATCACATATAACATCTTTGTATTACATCAAAACCACATTAGGTATATCAGTAGTGTTGGACTAAATTCACGTTTCTAA 3948 0.3956 MGLQAIYLLVLLSISLFIIVRLIIRSNPKKTDSIPNFPPGPRKLPIVGNIPHVVGSPPHRKLRELAKKYGPLMHLQLGEVFFIVVSSAEYAREVMKNHDVIFASRPRTLTSQIMFYDSTDIAFSPYGDYWRQLRKICTIELLSAKRVQSHWPIREEEMANLIKHIASEEGSIINLSQAVISLMYSITSRAAFGKKYMEQEEFISVVREFLRLAGGFYIGDLFPSAKFLQNLSGRRPKLEKLHQKVDRILENIINDHKEAKSRTKEGLIEGEEDLIDVLLKFEDSGSDLDFCLSKRNIKAIIFDVFTGGSDSAATTINWAMAEMMKDPRVLKKAQAEVRVIFERRGKVDKTCIDELKYLRAVIKEVLRLHPPAPLLIPRECGKACEINGYHIPVQTRVIVNAWAIGRDPKYWIEPERFYPERFIDSSVDYKGTSFEYIPFGAGRRICPGMNYGIANVELVLASLLYHFDWRLPKGMKSEDLDMTELFGASVIRKGSVSTMDHQILYFTSIFSLVIFVFMALKIVTKKSDSAPNLPPGPWKLPIIGNIHNLVGSLPHRQLRDLSAKYGPLMHLKLGEVSTIVVSSPEYAREVLKTHDLVFASRPPILASKILTYDSLGMSFAPYGDYWRQLRKICTLELLSSKRVQSFQPIRGEELTNLIKLIASKEGSPINLTKEVISTISTITSRSAFGKKCKDHKKFISVVKEATEVAGGFDLGDLYPSAKWLQHISGLKPKLEKLHQQADQIMQNIINEHREDKSKVTEDQGEEVGEDLVDVLLRQEFGLSDNSVKAVIMDIFGGGSETSSTTITWAMAEMIKNPRVMEKVQAEVREAFDKEGKPNEIGIEKLKYLKSVVKETLRLHPPGAFLLPRECGQACEINGYHIPLKSKVIVNAWAIGRDPNHWTEAERFYPERFIESSVDYKGNNFEFIPFGAGRRICPGLSFGLINVEFPLALLMYHFDWKLPNGIKNEDLDMTETFGVAVTRKDDLYLIPITYLLSFFLFLFIVFSIVWRSKSNPSNSKLPPGPPKLPFIGNIHQLGAMPHHGLAKLAQKYGPLMHIKLGGLSAIVVSSPEMAKEVMKTHDINFSNRPHLLAADIITYGSKGMSFSSYGSYWRQMRKISTFELLTPKRVESFQSIREQEASNLVKEIGFSEGSSINLSKMINSFSYGLTSRVALGGKSKDQEAFIAIMKDVLKIVSGFSIADLFPSIEVLQVLTGIRSNAEKLHQEIDRILEKIVNDHKEENSETREINEKAGEDLVDVLLRLQKQNNLEHPLSDSVIKANMLVSILQLEITYNIFVLHQNHIRYISSVGLNSRF. 1316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03051 1315 Pfam Cytochrome P450 534 981 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Pfam Cytochrome P450 38 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Pfam Cytochrome P450 1021 1284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 SUPERFAMILY Cytochrome P450 38 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 SUPERFAMILY Cytochrome P450 1019 1285 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 CDD CYP71-like 68 493 - -
Seca5g03051 1315 FunFam Cytochrome P450 71D8 30 499 - -
Seca5g03051 1315 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 929 938 IPR017972 GO:0005506|GO:0016705
Seca5g03051 1315 PANTHER OS08G0105600 PROTEIN 557 993 - -
Seca5g03051 1315 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Seca5g03051 1315 SUPERFAMILY Cytochrome P450 534 990 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Coils Coil 1213 1233 - -
Seca5g03051 1315 PRINTS P450 superfamily signature 797 814 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS P450 superfamily signature 850 861 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 PRINTS P450 superfamily signature 927 936 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Gene3D Cytochrome P450 1013 1289 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Gene3D Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Gene3D Cytochrome P450 526 986 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03051 1315 Coils Coil 734 754 - -
Seca5g03051 1315 FunFam Cytochrome P450 71D8 526 990 - -
Seca5g03051 1315 CDD CYP71-like 564 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03051 Seca-Chr5 85411926 85422480 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03051 506 994 Cytochrome P450 AT3G26300 43.195 1.94e-132 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03051 - K13267 fve:101299609 1167.53