Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03048 ATGGCCCCTCAAATCCATGACTTGTTAGCCATTTTCACCTTTTTTCTGTCCATGATTGTTGCACTTAAGATAAGGAACAATTTCAGAAAAACAGACTCAACTACGAATATACCTCCAGGGCCATGGAAGCTACCTATTATAGGAAATATTCCCCATCTTGTTGGTTCTCCACCACATAGAAAATTAAGAGAATTAGCAAAAAAATATGGACCCTTGATGCATTTGCAACTCGGTGAGATCTTCTTCATTGTTGTTTCCTCAGCAGAGTATGCTAAGGAGGTAATGAAAACTCATGATGTTATCTTTGCATCAAGGCCTCATCTTCTAGCCACAGACATTGTATCTTATGATTCCACAGATATAGCTTTTTCACCTTATGGTGATTACTGGAGACAGCTTAGGAAGATTTGTACTATAGAGCTTTTAAGCACAAAAAGGGTCAAATCTCTTTGGCCAATTAGAGAGGAAGAGATCAATACTCTCATCAAATGGATTGCTTCAAAAGAAGGATCACAAGTCAATCTTACTCAGGCAGTTATTTCAATGATTTATACATTCACTTCAAAGGCTGCTTTTGGTAAGACATATGCAGAACAAGAAGAGTTCATATCAGAGATGAAAAAACTTATAAATCTAGCTGGAGGTTTCTACACAGGAGACTTGTTTCCTTCAGCTAAATGGCTTCAAAACCTCTCTGGGATGAGGCCTAAACTTGAGAAGTTACACCAAAATGTAGACAGGACACTGGAGAAAATCATCAATGATCATAAAGAGGCAAGGTCAAGAGCTAAAGAAGATTTGGTTGAAGCTGAGGAAGATCTGGTTGATGTTCTCTTAAAATTTGATTTTCACTTAACTTCTAATAATATCAAGGCTATTATCTTGGATGTCTTCACTGCTGGGAGTGAGACTGCAGCAACTACCATTAACTGGGCAGTGGCTGAGATGATAAAGGATCCAAGAGTGTTGAAAAAAGCACAAGCTGAAGTGAGAGAGGTATTTGATAGGAGAGGAAGGATTGATGAAGCTGGCATTGAGGAGCTTAAATATTTGAAATCAGTCATCAAAGAATCCCTGAGATTACACCCTTCTGTTCCTCTTCTACTTCCAAGGGAATGTGGACAAGCCTGTGAGATTAATGGCTATCACATACCTGTCAAAAGTAGGGTCATAGTGAATGCTTGGACAATTGGAAGGGATCCAAAATATTGGAGTGAAGCAGAGAGGTTTTATCCTGAAAGGTTTATGGATAGCTCTATTGACTACAAAGGAACTAATTTTGAGTATATCCCATTTGGTGCTGGAAGGAGAATTTGTCCAGGCATGAACTATGGTATGGCAAATGTTGAGCAGGTTCTTGCATTGATATTGTATCATTTTGATTGGAGGCTTCCCAATGGAATGAAAAATGAGGACTTTGACTTGACAGAGGAATTTGGAATTACTGTGACAAGAAAAGGTGACCTATACTTGATTCCTATAGCTTCTCATAATTCTTTGCTTGCAACATAA 1512 0.3843 MAPQIHDLLAIFTFFLSMIVALKIRNNFRKTDSTTNIPPGPWKLPIIGNIPHLVGSPPHRKLRELAKKYGPLMHLQLGEIFFIVVSSAEYAKEVMKTHDVIFASRPHLLATDIVSYDSTDIAFSPYGDYWRQLRKICTIELLSTKRVKSLWPIREEEINTLIKWIASKEGSQVNLTQAVISMIYTFTSKAAFGKTYAEQEEFISEMKKLINLAGGFYTGDLFPSAKWLQNLSGMRPKLEKLHQNVDRTLEKIINDHKEARSRAKEDLVEAEEDLVDVLLKFDFHLTSNNIKAIILDVFTAGSETAATTINWAVAEMIKDPRVLKKAQAEVREVFDRRGRIDEAGIEELKYLKSVIKESLRLHPSVPLLLPRECGQACEINGYHIPVKSRVIVNAWTIGRDPKYWSEAERFYPERFMDSSIDYKGTNFEYIPFGAGRRICPGMNYGMANVEQVLALILYHFDWRLPNGMKNEDFDLTEEFGITVTRKGDLYLIPIASHNSLLAT. 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03048 503 Coils Coil 253 280 - -
Seca5g03048 503 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 CDD CYP71-like 68 489 - -
Seca5g03048 503 FunFam Cytochrome P450 71D8 30 493 - -
Seca5g03048 503 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 PANTHER OS08G0105600 PROTEIN 61 496 - -
Seca5g03048 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Seca5g03048 503 Pfam Cytochrome P450 38 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 Gene3D Cytochrome P450 30 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03048 503 SUPERFAMILY Cytochrome P450 38 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03048 Seca-Chr5 85365663 85367464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03048 39 493 Cytochrome P450 AT3G26310 42.766 3.58e-136 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03048 - - gmx:102665189 708.753