Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g03047 ATGAAAACCCATGATATTAACTTTGCATCAAGGCCTCAACTCCTAGCTTCAGAAATAATGTCTTATAATTCCACTGGTATAGCTTCTTCTCCTTATGGTAACTATTGGAGACAGCTACGAAAAATTTGCACATTGGAGCTTCTAAGCCTAAAACGTGTCAACTCATACAAGCCAATTAGAGAAGAAGAATTCTCCAATCTTGTCAAATGGATTATTGCTTCAGAGAAAGGATCACCAATCAACCTCACTCAAGCAGTACTTTCATCAATATACACAATTGTTTCAAGGGCTGCTTTTGGCAAGAAATGCAAAGACCAAGAAAAGTTCATATCTGCTTTAAAAGAATCAATAAAGATTGCAGGAGGTTTTGACTTAGGAGATTTGTTTCCTTCTACTAAATGGCTTCAACATGTCACTGGTTTGAAGCCTAAGCTTGAGAGATTGCATAGACAAACTGATGAGATAATGGAAAACATCATCAATGAGCACAAAGAAGCAAAGTTAAAAGCCAAAGATGACCAAAGTGAAGCAGAAGAAGATCTGGTAGATGTTCTCATAAAGTATGAGGATGGTACCAAGCAGGATTTTTCCTTAACCAGAAACAATATCAAGGCCATAATCCTGGATATCTTTGATGCTGGAGGTGAGACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGGTAAGGAATCCAAGAGTAATGAAGAAAGCACAAGGTGAGGTGAGAGAGGTTTTCAATATGAAAGGAAAGGTTGGTGAAAATTGCATCAATGAACTCAAATATTTGAAATTAGTTGTCAAAGAATTCCTGAGGCTACACCCTCCAGTACCTCTTTTGCTTCCTAGAGAATGTGGTCAAACATGTGAGATGCTTGGTTATGACATACCAGCCAAAAGTAAGGTCATAGTCAATGCTTGGGCAATTGCAAGAGATCCAAACTATTGGACTGAACCAGAGAGGTTTTATCCTGAGAGATTCATTGATAGCACTATCGACTACAAAGGGAGTAATTTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGCAGCACATTTGGTTTGAGAAATGTGGAGCTAGCACTTGCAATGTTATTGTATCATTCTGATTGGAAGCTTCCCAGTGGAATGAGAAGTGAAGAGTTGGACATTAAATTAAGAGACTTGGCCAGAAGATATGGACCTGTTATGCATCTTCAGCTTGGAGAGGTTTCTACAATTGTCATTTCATCACCAGAGTGTGCTAGGGAGGTGATGAAAACCCATGATGTTAACTTTGCAACAAGGCCTCAAATCCTTGCTACAGAGATAATGTCTTATAATTCCACAAACATAGCTTTTGCTCCTTATGGTAACTATTGGAGACAGCTAAGAAAAATTTGCACATTAGAGCTTTTAAGCCTAAAACGTGTCAACTCATATCAGCCAATTAGAGAAGAAGAGTTCTCCAATCTTGTCAAATGGATTGCTTCAGAGGAAGGATCACCAATAAACCTAACTGAAGCAGTAATTTCATCAATATACACAATTGTTTCAAGGGCTGCCTTTGGCAAGAAATGCAAGGACCAAGAAAAATTCATATCAGTGTTAAGAAAAGCACTAAAGGTGGCATCTGGCTTTGACTTAGGAGATTTGTTTCCTTCTAGTACATGGCTTCAAGTCATCACTGGTGTGAGGCCTAAGCTTGAGAGGTTGCATAAACAAGCTGATCAGATAATTGAAAACATCATCAATGAGCATAAAGAGGCAGAGTCAAAAGACACAGATGAAGAAGGTGGAGCAGAAGATTTGGTTGATGTCCTCATAAAATATGAGGATGGTAGCAATCAGGATTTTTCCTTGACTAAAAACAATATCAAGGCCATAATCCTGGACATCTTTGGTGGTGGAGGTGAAACATCAGCAAGCACCATAGATTGGGCAATGGCAGAAATGGTGAGGGATCCAAGAGTAATGAAGAAAGCACAAGGTGAGGTGAGGGAGTTTTTCAATATGAAAGGAAGGGTTGATGAAAATTTCATCAATGAACTCAAATATTTGAAATCAGTTGTGAAAGAAACCTTGAGGTTACACCCTCCAGCACCTCTTTTGCTTCCTAGAGAATGTGGTGAAGCATGTGAGATAAATGGTTATCACATACCTGCCAAAAGTAAGGTCATAGTCAATGCTTGGGCAGTTGCAAGAGATCCAAACTACTGGACTGAACCAGATAGATTTTATCCAGAGAGATTCATTGATAGTACTATTGACTACAAAGGGAATAATTTTGAGTATATTCCTTTTGGTGCTGGAAGAAGAATATGTCCAGGGAGCACATTTGGTTTGAGAAATGTTGAGATGGCACTTGCAACACTGTTGTATCATTTTGATTGGAAGCTTCCCAGTGGAAAGAGAAGTGAAGAATTGGATATGACTGAGGAATTTGGAGTTGCAATGAGAAGAAAAGATGATCTTTTATTGATTCCTTTTGCTTATCATCCATTGCCTGTTGCATGA 2508 0.3888 MKTHDINFASRPQLLASEIMSYNSTGIASSPYGNYWRQLRKICTLELLSLKRVNSYKPIREEEFSNLVKWIIASEKGSPINLTQAVLSSIYTIVSRAAFGKKCKDQEKFISALKESIKIAGGFDLGDLFPSTKWLQHVTGLKPKLERLHRQTDEIMENIINEHKEAKLKAKDDQSEAEEDLVDVLIKYEDGTKQDFSLTRNNIKAIILDIFDAGGETSASTIDWAMAEMVRNPRVMKKAQGEVREVFNMKGKVGENCINELKYLKLVVKEFLRLHPPVPLLLPRECGQTCEMLGYDIPAKSKVIVNAWAIARDPNYWTEPERFYPERFIDSTIDYKGSNFEYIPFGAGRRICPGSTFGLRNVELALAMLLYHSDWKLPSGMRSEELDIKLRDLARRYGPVMHLQLGEVSTIVISSPECAREVMKTHDVNFATRPQILATEIMSYNSTNIAFAPYGNYWRQLRKICTLELLSLKRVNSYQPIREEEFSNLVKWIASEEGSPINLTEAVISSIYTIVSRAAFGKKCKDQEKFISVLRKALKVASGFDLGDLFPSSTWLQVITGVRPKLERLHKQADQIIENIINEHKEAESKDTDEEGGAEDLVDVLIKYEDGSNQDFSLTKNNIKAIILDIFGGGGETSASTIDWAMAEMVRDPRVMKKAQGEVREFFNMKGRVDENFINELKYLKSVVKETLRLHPPAPLLLPRECGEACEINGYHIPAKSKVIVNAWAVARDPNYWTEPDRFYPERFIDSTIDYKGNNFEYIPFGAGRRICPGSTFGLRNVEMALATLLYHFDWKLPSGKRSEELDMTEEFGVAMRRKDDLLLIPFAYHPLPVA. 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g03047 835 CDD CYP71-like 396 822 - -
Seca5g03047 835 PRINTS P450 superfamily signature 213 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS P450 superfamily signature 686 697 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS P450 superfamily signature 763 772 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 CDD CYP71-like 1 387 - -
Seca5g03047 835 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 345 354 IPR017972 GO:0005506|GO:0016705
Seca5g03047 835 SUPERFAMILY Cytochrome P450 388 825 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PANTHER OS08G0105600 PROTEIN 389 831 - -
Seca5g03047 835 Gene3D Cytochrome P450 1 385 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 Gene3D Cytochrome P450 386 822 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 765 774 IPR017972 GO:0005506|GO:0016705
Seca5g03047 835 Coils Coil 570 590 - -
Seca5g03047 835 Pfam Cytochrome P450 4 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 Pfam Cytochrome P450 385 819 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 FunFam Cytochrome P450 71D8 390 826 - -
Seca5g03047 835 FunFam Cytochrome P450 71D8 1 389 - -
Seca5g03047 835 SUPERFAMILY Cytochrome P450 2 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 510 528 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 772 795 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 642 668 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 762 772 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 418 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 726 750 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 685 703 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 394 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 PRINTS E-class P450 group I signature 622 639 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca5g03047 835 Coils Coil 156 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g03047 Seca-Chr5 85340168 85346395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g03047 390 826 Cytochrome P450 AT3G26310 42.601 7.20e-128 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g03047 - - gmx:100778040 755.362