Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02996 ATGGAAATTAGGGGGGAGGATGAGATTGTAGACATGTCAATGTCACCCCCATCAGGGGATCACAACAAGGACTTCATGTCTCAAGCATACCTTCAGAATATGTACTCAGAGATTGACATAGAAGTTGAAGATTCCAGTTTCAACCAAAATCGCCCCCTCCCCATATTTCTCAAGTTTGAAGATGTAGAGTATAAGGTGAGAAATAACCAAGCAGGCTCTAATAACCCTGTAAAGATCATGGTGTCAAAGGTAGCCACACAACTCACTGTGGAAGAAGATAGATACAAGAAAATTTTGAAGGGCATCACAGGAAGCATTGGTCCTGGTGAAATTCTTGCTCTGATGGGTCCTTCTGGCAGTGGGAAGACGACCTTGTTGAGAGTTATAGGAGGGAGATTAGTTGACAATGTAAAGGGAAAAATAACTTATAATGATGTTCGATATACTCCAGCTGTCAAAAGGAGGATTGGATTTGTGACACAAGAGGATGTGCTTTTTCCAGAATTAACTGTAGAAGAAACATTAATCTTCTCAGCATTCTTAAGGCTGCCAGCTAATATGAGCAAGCAGCAAAAATATGCAAAAGTGGAGACCACTGTGAAGGAGCTAGGCCTTGAAAGATGTCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGCATATCAGGTGGAGAAAGGAAGAGAACTAGCATAGGCTATGAAATTCTTGTTGATCCTTCACTGCTGCTGCTTGATGAACCAACTTCAGGCCTTGATTCCACCTCAGCAAACAAACTCCTTCTCACTCTTCAGGGACTTGCTAAGGCTGGGAGGACCATAATCACCACAATACACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTACTTCTTATAGCAGAAGGTTATCCTGTTTACTATGGGAAGGCTGGAGAAACAATGGAGTACTTTTCATCTTTGAGGTTCATACCAGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATCACATAAGTATTCCAACAGATATTTTGGTTGATCAAGAATCTGCTGACTCCTCAAAAGCTGTTATTAAATATCTACAACTCAAGTACAAAGCTTTACTGGAGCCAAAAGAAAAAGAGAACCATGGAGAAGCAAACACACCGGAACATCTTCAACTAGCCATTCAGGTCAAGAAAGAGTGGACATTGAGTTGGTTTGACCAATTTGTGATTCTTTCTAGGAGAACATTCAAAGCAAGATGCAAGGACTATTTTGATAAGTTAAGACTAGTACAAGCACTTGGAATTGCACTTTTGTTGGGGCTCCTTTGGTGGAATTCTTCAACCAATACAGAAGCTCAACTCAGAGACCAGGTTGGTTTAGCATTCTACATCTGTATATTCTGGACATCTACATGCATTTTTGGAGCAGTCTATGTCTTCCCATTTGAAAAGTACTACTTAATAAAGGAAAGGAAAGCTGACATGTATAGATTAAGTGTATACTATGCATGCAGCACCCTATGTGACATGGTGGCACATGTTTTCTATCCTACTTTTTTCATGGTTATCTTGTACTTCATGGCTGGCTTTAAGAGGACTGTTGCTTGCTTCTTCCTGACATTATTTACTGTTCTGCTAATAGCCATAACAAGTCAGGGGGCAGGAGAACTGTTTGGAGCTGCAGTTATGAGTATAAAAAGATCAGGAATGGCTGCTTCTTTGGTACTAATGTTATTCCTTCTTACAGGTGGCTACTATGTCCAGCATATACCAAAGTTCATGAGGTGGTTGAAGTATTTGTCATTCATGTACTATGGTTTCAGGCTTCTTCTAAAGGTGCAGTATTCAGGAGACCAATTATATGATTGTGAAAGCCAAGGAGGGTGCAGGACACTGCAGAGTTCACCTACATTTGACACTGTAAACTTAAAAGGTGGCTTAGAAGAAGTTTGGGTTATGCTGGCCATGGCTCTATGTTTCCGCTTATTAGCTTACTTTTGCCTCCGTAGAAGAATTGATGTCTCTAATTAA 2025 0.4069 MEIRGEDEIVDMSMSPPSGDHNKDFMSQAYLQNMYSEIDIEVEDSSFNQNRPLPIFLKFEDVEYKVRNNQAGSNNPVKIMVSKVATQLTVEEDRYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVIGGRLVDNVKGKITYNDVRYTPAVKRRIGFVTQEDVLFPELTVEETLIFSAFLRLPANMSKQQKYAKVETTVKELGLERCRHTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLIAEGYPVYYGKAGETMEYFSSLRFIPEIPMNPAEFLLDLATGQVNHISIPTDILVDQESADSSKAVIKYLQLKYKALLEPKEKENHGEANTPEHLQLAIQVKKEWTLSWFDQFVILSRRTFKARCKDYFDKLRLVQALGIALLLGLLWWNSSTNTEAQLRDQVGLAFYICIFWTSTCIFGAVYVFPFEKYYLIKERKADMYRLSVYYACSTLCDMVAHVFYPTFFMVILYFMAGFKRTVACFFLTLFTVLLIAITSQGAGELFGAAVMSIKRSGMAASLVLMLFLLTGGYYVQHIPKFMRWLKYLSFMYYGFRLLLKVQYSGDQLYDCESQGGCRTLQSSPTFDTVNLKGGLEEVWVMLAMALCFRLLAYFCLRRRIDVSN. 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02996 674 MobiDBLite consensus disorder prediction 1 21 - -
Seca5g02996 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 314 IPR027417 -
Seca5g02996 674 CDD ABCG_EPDR 80 303 - -
Seca5g02996 674 Pfam ABC-2 type transporter 278 339 IPR043926 GO:0140359
Seca5g02996 674 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 79 321 IPR003439 GO:0005524
Seca5g02996 674 FunFam ABC transporter G family member 22 86 315 - -
Seca5g02996 674 SMART AAA_5 108 299 IPR003593 GO:0016887
Seca5g02996 674 Pfam ABC transporter 99 249 IPR003439 GO:0005524
Seca5g02996 674 Pfam ABC-2 type transporter 405 613 IPR013525 GO:0016020|GO:0140359
Seca5g02996 674 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 662 - -
Seca5g02996 674 Gene3D - 81 316 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02996 Seca-Chr5 84462831 84465808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02996 97 282 Calmodulin-binding Proteins AT2G36910 31.414 9.68e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02996 K05681 - gmx:100806094 1162.52