Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02994 ATGGATACTGGGTTAGAAAATATCTCTGGTGAGCATGTAGAACATCCTAATTCAGAGGATCATGTAGAAGAATTAATTTCAGAGGATCGAGTACAAGAAAATATGCCAGAGGCAGAGGTTCGCAGGATAATAGATTTGTCTAGTAAAGACATAAAGGGTTTGGAGTTTGGAAGTGAAGAAGATGCTTATAATTTCTATTTTTCATATGCCAGATGTCATGGCTTTGCTGTGAGGAAAGATGATGTAATTTGGGATGTCAAAGGCAATGTTATTATGCGTCAATATTTATGTAGCAAAGCTGGGTTGAGGGACAAAAAGCACTTTTTGAGGGTAGATCATAAAAAATACCATAGGCCTTTAACTCGTGTTAACTGTGAAGCAAAGTTGCGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCGGCAAAATTTGTCCCTTTAATTCCTTCATATCGTGGCTTGTCTGAAGGTGATAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACTTATTGGATCTAAAGGGAGGTTATGCCAATGTAGGATTTTGTAAAAAGGATTTATACAACTACATAGATGAGGTGAAGCATGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGAAAAGCAGACAATGAACCAGTTTTTTTTCTCTAG 741 0.3711 MDTGLENISGEHVEHPNSEDHVEELISEDRVQENMPEAEVRRIIDLSSKDIKGLEFGSEEDAYNFYFSYARCHGFAVRKDDVIWDVKGNVIMRQYLCSKAGLRDKKHFLRVDHKKYHRPLTRVNCEAKLRVRYDYKTGKFKVVSFIECHNHELTPAKFVPLIPSYRGLSEGDKAQVDALHSHGVRPCQIMGYLLDLKGGYANVGFCKKDLYNYIDEVKHGKIKDGDAMAALSYLQGKADNEPVFFL. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02994 246 MobiDBLite consensus disorder prediction 1 21 - -
Seca5g02994 246 MobiDBLite consensus disorder prediction 7 21 - -
Seca5g02994 246 Pfam FAR1 DNA-binding domain 64 154 IPR004330 -
Seca5g02994 246 PANTHER OS01G0519700 PROTEIN 50 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02994 Seca-Chr5 84441858 84442598 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca5g02994 FAR1 7e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02994 - - ccaj:109794460 283.108