Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02970 ATGGACAAACAGAATCAGAATCAATACTACCATGTTGTAGAAAACCCATTTGGGTATTTAGATTGTGGTTGTTGGGGTTGGGGGTGTGCCTCTTGTACAGTGATGAAGTGGGTGTTTTATTCACTTGGTTTGCCTAACTGGAATTACCGTGGACTTCTTTATTGGAAGGATTATCATGAACACAATAAGATCATGTCTTTGCTAATGGATGCTAAGTCAGCTGTAGATTTAATGGAGTCTTCCTCTGAGGTTCATTTTTCTGGATTTCACATGGATGGTTATGAGAAAAGAGAGGCCAACACAGAACAACCAACAACATCAGAAACTGACATGTATAAACAACCTTTTGTCATAGGTGTTGCTGGGGGTGCTGCATCTGGCAAGAAAACAGTTTGTGACATGATTATTCAGCAGCTTCATGACCAGCGAGTTGTACTTGTTAACCAGGCAACGAACACCTTCTATTCATACTTATTGGATTCTTTTTATAATAACTTGACTGAGGAGGAACTTACAAGAGTACAGGATTACAACTTTGACCATCCTGGTCAGTACAATTATACTTCTTAG 570 0.393 MDKQNQNQYYHVVENPFGYLDCGCWGWGCASCTVMKWVFYSLGLPNWNYRGLLYWKDYHEHNKIMSLLMDAKSAVDLMESSSEVHFSGFHMDGYEKREANTEQPTTSETDMYKQPFVIGVAGGAASGKKTVCDMIIQQLHDQRVVLVNQATNTFYSYLLDSFYNNLTEEELTRVQDYNFDHPGQYNYTS. 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02970 189 Gene3D - 111 189 IPR027417 -
Seca5g02970 189 PANTHER URIDINE KINASE 77 180 - -
Seca5g02970 189 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 185 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02970 Seca-Chr5 84177220 84180238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02970 69 186 PRT Gene Family AT4G26510 56.667 1.79e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02970 K00876 - gmx:100792258 194.126