Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02965 ATGGCAGAAATTGCGGTGAACCTGGTGATTGACAAGCTGATTCCATTGCTGAGGTATGAAGTGGCAGTGCTGAAAGAGGTGCACAATCAGGTAGCCGACATCAAGGATCAATTAGGCCTGATACGAGCATACCTGAGGGATGCAGATGTGAAAGCAGATAGAGAAGAAAGGAGTGATGTGGTGAAAGAGTGGGTGAAGCAAGTGAGGGAAGTAGCGCATCGAATTGAAGATGTGATCGATGAATACCTGCTCCAAGTTGCGGAGCGGAGGCAAAAGCGTGGAATAATTGGTGTGGTAGAGAAGATAGCGCGGTTGTTGAGAAGCATAGAGCCGCGACGTGTGATAACCGCAGAGATTCGTGATATCAACACAGTGATAGCCACACTTGATAAACGGAAAGACGTTTTGGGGTTCAATCCAATTGCGGAGTCAAGCAGTGCTGCAAAGACTTTTACTACGGTGTCAGGGCATGACCTTCGAAGGGCTGCACTGTTCCTTCATGATGCTAAGCTTGTGGGAATCAACGATTCAAAAAGGAAACTCAAAAGCTTGCTCGTGGAGGAAGATTCTAGACGCACCATCATCGCCATTGTTGGCACCGGGGGACTCGATAAAACAACAATTGCGAAGAAACTATATGAGATGGAGAAACAAAAAAAGTTCGATTGCAGTGCTTGGGTGCCTGTGTCTAGCACGTTCAAGGAGAAGAAAATATTTAGGATGATGTTGCAAAGCTTTTATGACCAAGAGGATGAGGATCATGATGAGACTAAGGCCGTGCTAATTAAGAAAATGAACAAGGCCACTCTGATAAGAAAAGTGAGAGAATATTTGCAAGAAAGGAGATATCTGATTGTGTTTGATGATGTTTGGGCAGAAGACTTTTGGGGTTGTGTGGAATTTTCATTACCAGAAAATAACAGAGGAAGCAAAATACTCATCACAACAAGACACATGGGTGTTGCACAATTTTGCAAGAGCTATGCTCATGTTCACATCCATGAGTTGAAAACTTTGTGTTCAAAGCATGCCATGGAATTATTCCATTCCAAGGCATTTCAGTTTCATCCAGAAGGGTGTCCCATAGAACTAATGAAATTGTCACAAGACATTGTGAACAAGTGTGATGGAGTGCCACTAGCTATTGTCTCCATTGCCAGTCTCCTTTCCACAAAAAACAACAACATTTCTGAATGGCAAAAGGTTCATGATAGTCTTGGCTCAAGACTAGCTAGTGATCCTCATCTTAAAAGCTACCACCAAGTCTTATCAGAAAGTTACCATGATCTTCCTTCCCACCTTAAGCCATGCCTCTTGTACTTTGGCCTTTTCCCTAATGGCTACTCTATCAGGTGTGCAAGACTTCTTCGTCTATGGATAGCAGAGAGATTTGTAAATGTAAATGAGAATGAAAATCGTACCCAAGAGGAAGTTGCTGAAGAATACTTGGATGAATTGATTCGTAGGAGTCTAGTTATAGTGTCCTCTAAGTTTATTGATGGCAGGGCCAGAACCTGTAAGGTGCATGATCTGTTGCATGACTTTATTAAGGGAAAGTGTTTGGAGTTGGACTTTTGCCAAGTGATAAGAAATGAAAACTTTACCTTCAATGCAACAACTAGACGTTTGTCAATCCAATTGGAACCTAACAAAGAAAAAGATGCTTTAGCACTTGAAAGAGTTATTGTAGCAGATCATGGTCGAGTACGGTTCTGTTTTGCTTTTAACTTGGATGAGATGCCAAGGTCTCTGGTGAAATCCTTCTTCTCCAGCTTCAAGCTCTTAGTAGGATTGGATTTTGAAAATGCCCCTCTTGATCATCTTCCTGATGCAGTTGGATACTTATTGCATCTCAAGTATTTGAACTTACAGAATACCAAAATCAAGTCCCTTCCAAGGTTCATTGGCAAGCTTCAGAACCTAGAGACTCTAGATATAAAATACACTCAAGTGCATGAGTTACCTAGTGAGATTAACATGCTCACAAGGCTTCGCCATCTTCTGGCATCTTCCATCAATGAGGTAACAGGATTCCATTCAGCATCTATGCAAGGAGTGGTGGTAAAGAAAGGGATTGGGGATTTAAAGGAGCTGCAAAAGCTATCAAGAGTTGATATGAGTAATGGAGATAGCCTAATCAAGGAAGTGAAAAAATTGAAGCAATTGGGAAGACTTGGACTTGTTAAGCTAAGAGGACATCATGGAAAACAGTTGTGCATTGCAATAGAGGGAATGACACATCTTCAGTCTTTGAACATTGCAGCAGCAGAGGAGCATGAAATTCTTGACCTGCACTCATTGGTTAATCCTCCTCATAACCATCTCCAACGCCTCTATCTACATGCACGTTTAGAAACTCTGCCACGTTGGATTTCAAAGCTCCATGTTCTGGTGAAATTATTCTTGGATTGGTCAAGATTAACGGAAGATCCACTACCATTTCTTAAAGACTTGCCAGAGTTGTTGGAGCTTGAGCTTTATAATGCATTTGAAGGTGTTGAGTTGTATATAGGAAAGGGTTGGTTCAAAAAATTGAAAGATTTACGCTTAGAAAAGATGCAAGCCTTGAAGACCTTGAAAATAGATAAAGGAGCACTGCCTCTTCTTGAAAAGCTGACAATTGGGCCATGCCCTCAAATGGAGGAGGTTCCTCATGACATCCAGAATCTACAAGCTCTCCAACATCTTCGGTTCTATGAAATGCCTATGAACCCAATGGAAGAGAATGGTTGTGGCATATTGAAGAACATACCATTTGTGTTGTACTCCAAGGGCAACAAGTTCTACACTCTTCACAATGATGCAGGGAATGAAATCGATGACTTTTAG 2829 0.4171 MAEIAVNLVIDKLIPLLRYEVAVLKEVHNQVADIKDQLGLIRAYLRDADVKADREERSDVVKEWVKQVREVAHRIEDVIDEYLLQVAERRQKRGIIGVVEKIARLLRSIEPRRVITAEIRDINTVIATLDKRKDVLGFNPIAESSSAAKTFTTVSGHDLRRAALFLHDAKLVGINDSKRKLKSLLVEEDSRRTIIAIVGTGGLDKTTIAKKLYEMEKQKKFDCSAWVPVSSTFKEKKIFRMMLQSFYDQEDEDHDETKAVLIKKMNKATLIRKVREYLQERRYLIVFDDVWAEDFWGCVEFSLPENNRGSKILITTRHMGVAQFCKSYAHVHIHELKTLCSKHAMELFHSKAFQFHPEGCPIELMKLSQDIVNKCDGVPLAIVSIASLLSTKNNNISEWQKVHDSLGSRLASDPHLKSYHQVLSESYHDLPSHLKPCLLYFGLFPNGYSIRCARLLRLWIAERFVNVNENENRTQEEVAEEYLDELIRRSLVIVSSKFIDGRARTCKVHDLLHDFIKGKCLELDFCQVIRNENFTFNATTRRLSIQLEPNKEKDALALERVIVADHGRVRFCFAFNLDEMPRSLVKSFFSSFKLLVGLDFENAPLDHLPDAVGYLLHLKYLNLQNTKIKSLPRFIGKLQNLETLDIKYTQVHELPSEINMLTRLRHLLASSINEVTGFHSASMQGVVVKKGIGDLKELQKLSRVDMSNGDSLIKEVKKLKQLGRLGLVKLRGHHGKQLCIAIEGMTHLQSLNIAAAEEHEILDLHSLVNPPHNHLQRLYLHARLETLPRWISKLHVLVKLFLDWSRLTEDPLPFLKDLPELLELELYNAFEGVELYIGKGWFKKLKDLRLEKMQALKTLKIDKGALPLLEKLTIGPCPQMEEVPHDIQNLQALQHLRFYEMPMNPMEENGCGILKNIPFVLYSKGNKFYTLHNDAGNEIDDF. 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02965 942 Gene3D Ribonuclease Inhibitor 567 928 IPR032675 -
Seca5g02965 942 Gene3D - 4 116 - -
Seca5g02965 942 PANTHER DISEASE RESISTANCE PROTEIN RP 62 869 IPR044974 GO:0006952
Seca5g02965 942 SUPERFAMILY L domain-like 507 911 - -
Seca5g02965 942 CDD RX-CC_like 2 124 IPR038005 -
Seca5g02965 942 Gene3D - 426 520 IPR036388 -
Seca5g02965 942 PRINTS Disease resistance protein signature 696 712 - -
Seca5g02965 942 PRINTS Disease resistance protein signature 277 291 - -
Seca5g02965 942 PRINTS Disease resistance protein signature 194 209 - -
Seca5g02965 942 PRINTS Disease resistance protein signature 375 389 - -
Seca5g02965 942 FunFam Probable disease resistance protein At1g61300 156 330 - -
Seca5g02965 942 Gene3D - 152 333 IPR027417 -
Seca5g02965 942 FunFam Probable disease resistance protein At1g63360 427 517 - -
Seca5g02965 942 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
Seca5g02965 942 Pfam Rx N-terminal domain 5 92 IPR041118 -
Seca5g02965 942 Gene3D - 339 425 IPR042197 -
Seca5g02965 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02965 Seca-Chr5 84122880 84127671 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02965 195 382 WRKY Transcription Factor Family AT5G45050 24.870 6.35e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02965 K13457 - qsu:111987192 730.324