Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca5g02820 ATGAAGCTCTCAACTTCAACTTCTTCTTCTCATGCACCCCTACCACCATCTTCCTCCACCACAACTATGTGTAACTCCAAAAACTCCACTCCAGGGTGTTTCACAGTCATCTTGCGCAAGATTCTTTGCTCTAGTTGCCTTCCAAAAGACCCATCAGATCAAATTAGAGAACTTGATTCATCAAATTCAATGGGGAGTGAAAAAGATCAAAACTTGAAGGCTAAGCAGAATGCTGAAGCTGAGGCTGGGGCTGGGGCTGCTGCTACTACTACTACTCCTGGGATAGTGGCAAGGTTAATGGGTTTGGAATCAACACCAGTTTCTCTTTCACGTAGCCGATCCATGAATTCTGTGGACTGTTTGGGAGAATGCAATCGAATGCAGGATCTGCATAAGCGGGTTAAGTCCACATTGTCTTTTAGGGAATTGCCAACTTTTCTTTTAATTGAAAATGACAACTTTTTGGTACTTAGTTTTGAAAATGGAGGTGAGAACAGAGCATTCAAATCCAATGGGGGAAAAAGAGAAAGGGGTTGTGTAGAATTGAAGCAGAAAATGGCAACAGAGAGGGGTGAGTTGAAGGAAGATAAGAGAGAAAAAGTGTGTGATAAGAAGAATTTGAGTAAAAAGGGGAAACTGAGGAACAATAGGGTGTCTGATATGTCTTGTGGAAATATTGGAAGTGATGTTAAACTTCAAGAAATCACCAACACTTCGCATCAGTTCAAGGCTTCATCTAAAAAGAAGTGTTTTGATTCAGAAGGGGTGAAATTGGCACACCCCATGAACCGCAAGGAAGCTGTGATTAGTGAAAAGAAAAGGAGAAGGAAAAAGAAAACAAATTGTTACACAGAAAACAAGATGGAAATTGAATGCAAATCAGAAGATTCAAGCCCTGTTTCTGTCCTTGACTTTGAGCGTGAAGCCTCAGGAACAGTTGGATTGAGTTCAAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAACACTTTCCTCTGCGTTCTGATGGTAACTTGATGATTGATGAGAGGAAAGATAAGGAAGTTAAGAACAACAAATATGAAGGATCAAAGAAAAAAGAAAAGCACAGCAAGGAGTATATAGATATTTGGAATGAAGTTTGCAAGCTAGTTGAAGGTGAATTGGCTGAATCATATCAGTTTCATGCATGGATCAATAAACAATGTGATTTAGAAAGCATAAGTGCAGATTTTGAGTCAGAAATTTTGGATCTTTTGTTAAATGAGCTGATGGATCAACTTGTTGAGCATCCACTCACAAGTTTGTAA 1290 0.3946 MKLSTSTSSSHAPLPPSSSTTTMCNSKNSTPGCFTVILRKILCSSCLPKDPSDQIRELDSSNSMGSEKDQNLKAKQNAEAEAGAGAAATTTTPGIVARLMGLESTPVSLSRSRSMNSVDCLGECNRMQDLHKRVKSTLSFRELPTFLLIENDNFLVLSFENGGENRAFKSNGGKRERGCVELKQKMATERGELKEDKREKVCDKKNLSKKGKLRNNRVSDMSCGNIGSDVKLQEITNTSHQFKASSKKKCFDSEGVKLAHPMNRKEAVISEKKRRRKKKTNCYTENKMEIECKSEDSSPVSVLDFEREASGTVGLSSRRKLSPELENDQHFPLRSDGNLMIDERKDKEVKNNKYEGSKKKEKHSKEYIDIWNEVCKLVEGELAESYQFHAWINKQCDLESISADFESEILDLLLNELMDQLVEHPLTSL. 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca5g02820 429 MobiDBLite consensus disorder prediction 54 88 - -
Seca5g02820 429 MobiDBLite consensus disorder prediction 1 26 - -
Seca5g02820 429 MobiDBLite consensus disorder prediction 314 358 - -
Seca5g02820 429 Pfam DUF761-associated sequence motif 90 106 IPR032795 -
Seca5g02820 429 MobiDBLite consensus disorder prediction 57 71 - -
Seca5g02820 429 PANTHER OS05G0128300 PROTEIN 18 425 - -
Seca5g02820 429 MobiDBLite consensus disorder prediction 321 358 - -
Seca5g02820 429 Coils Coil 179 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca5g02820 Seca-Chr5 81727100 81728808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca5g02820 26 421 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.927 1.08e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca5g02820 - - gmx:102660067 482.641